Ll_transcript_384152

• Id Trinity: TRINITY_DN47224_c1_g7_i1
• Name Transcript: Ll_transcript_384152
• Sequence: TGTTAATTTCCAGGTACCTATTTAAGGTGATTGTACCAAACAAAGACTACTACCTTACATTTCCTTCACTTTCTCATTCACAGACACAAATTAAAACCTC GTCCTCTGTCCCATCTAATTTTCATACATGGCAACTCCCCTGTTATTCCTCTTATTCATGCTCTGCATCTCACACTCTTCACAAATGCTTCTATTGCCAC TCACACACTCACTTTCCATAACCCAATTCAACAGTACCCACCACCTCCTCAAATCCACCTCCACCCGTTCCCTAGCCCGCTTCCACCGCTACCGCCACCG CCAAATCTCTCTCCCACTCTCACCAGGCAGCGACTACACCCTCTCCTTCAATTTAGGACCCCACCACCATCCCCAACTCATCACCCTCTACATGGACACT GGCAGCGACCTCGTTTGGTTCCCATGCGCTCCCTTTGAGTGCATCCTCTGCGAAGGTAAACCCATCCCTAACCCTAAATTCAAGCCTCATAACCTCACTC TCTCCCAATCCGACGCCGTTTCGTGCCAATCACGTGCATGCTCTGCCGCACATAATCACGTTTCTAACTCTGACCTTTGCGCTATGGCACGGTGTCGTTT GGACAATATTGAAATGCATGATTGCTCTTCTGCTACGTGTCCACCTTTTTACTATGCTTACGCTGATGGAAGCTTAGTTGCTAAACTTTACCGTAATACG CTTTCGATTTCTTCGCTTCTCCTTCGTAACTTCACGTTTGGATGCGCCCACACCACACTTGCTGAACCAACCGGTGTAGCTGGTTTCGGTCGGGGAGTTT TGTCTTTCCCTGCTCAGCTTTCAATTTTGAATCCCAAACTTGGTAACCGTTTTTCTTATTGCTTGGTTTCTCACTCGTTTGAAGGGGGACGAGTTAACCC ACCGAGTCCACTCATCCTCGGTCGTTACGATAGCACTAAAGGAGATGAAGACGTTGAGTTTGTTTACACCTCCATGCTTTCAAACCCGAAGCACCCTTAT TTCTACTGCGTTGGGCTCGCTGGAATCTCCGTCGGGGATAAGAAACTTCCCGCGCCGGAGATGCTGAAAAAAGTGGATTATAAGGGAAATGGTGGTGTGG TTGTTGATTCCGGCACGACGTTCACGATGTTGCCGGCGAGTTTATATAACTCGGTGGTTACTGAGTTCAATGCTCGAGTCGGAAGAGTTCACGTGCGTGC GAGTGAGATTGAGAATAAAACGGGCCTCGGACCGTGTTATTACTTGGACCGGGTTTCGGAGGTTCCAACGGTGACGTTTCATTTCGTGGGGAATGATTCG GGTGTGGTCCTGCCTAGGAGGAACTACTTCTATGAGTTTTTGGACGGTAGTGATGAAGTTAGGAGGAAGAGGAAAGTGGGGTGCATGATGCTGATGAACG GTGGTGATGACACCGAGTTAGTCGATGGGCCCGGTGCTACTCTTGGCAATTATCAGCAGCAAGGGTTTGAAGTTGTGTACGACCTGGAAAAGCAGCGCGT GGGTTTCGCGAAGAGGCAATGCGCTTTGCTGTGGGATAACCTAAACCATGGGAAAAAATAAGGATATGCTACGCTGCGTAGTATTGGATTATCCCTCAAA TGCATTCGGCTTACTGCAAGTCAAAATAAGGTCGCGAGTTTAGGACCAGCATATACACTGTTTATGTCGATGTGTATATATGTAAGTTTAATTTACTGTT TTAATATCTGTACATGGTACATAACGTTTTTTACTTATTCAATTTATTATTCATTAATTCAGGTGTATTATATAGGGTACACATATGTTATCTCATAGTT TGTGTCACTCCATGTGCTATGGAGTTATGATTGGTCAGAAAAAACATATTTAAGTTAAAATTTAATTATTAAGTATTTTCCTTACTTATAATTATGAGAA AAGATGAATGCATTGATGGTGTAAGAATTTTTAAAGTAATTCTTAAATAAAAG
• Tissue: pods
• Gene name: LI_gene_150841;
• Additional information: details;

Expression of Ll_transcript_384152

FPKM

• PAB: 4.2
• PNAB: 3
• PS1: 2.3
• PS2: 0.9
• PS3: 1.7
• PW1: 2.8
• PW2: 3.3
• PW3: 1.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_384152

• Blastp: Probable aspartyl protease At4g16563 from Arabidopsis with 59.42% of identity
• Blastx: Probable aspartyl protease At4g16563 from Arabidopsis with 58.97% of identity
• Eggnog: aspartic(ENOG410XNV7)
• Kegg: Link to kegg annotations (AT4G16563)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019445061.1)
• Pfam: Xylanase inhibitor N-terminal (PF14543.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;