Ll_transcript_384058

• Id Trinity: TRINITY_DN47227_c1_g17_i1
• Name Transcript: Ll_transcript_384058
• Sequence: AGAAAGAAAAAGGACATGAAACTGGTAGTGGAGGTTATTAATGCTCACAATCTTATGCCAAAAGATGGTGAGGGATCAGCAAGTCCATTCGTAGAAATAG ACTTCGAAAACCAGCTGAGCCGAACCAGAACTGTTCCGAAGAACCTCAACCCCACTTGGAATCATAAACTAGTCTTTCATATAGATGCAACCAAACCTTA CCATCGCCAAACCATTGAAGTCTCAGTCTACAACGATAGAAAGAGACCTATTCCTGGCCGAAACTTCCTCGGGAGGGTAAGAATTCCATGCTCTAATATT GTCAAGGAAGGTGATGAAGTTTATCAAACTTTCCCACTAGAAAACAAGTGGTTTTTCTCATCTGTGAAGGGTGAAATTGGCCTCAAAATATACATTGCAT CTGAATCCAAACCTAAAGCTCTTTCACCCTTTTCTTCATCAGAACTAGGCAAACTGGTACCTTCTACTCCACCGCAAGTACCACAATCCACTACTAACCT TCCTTCCCCTCCTCCTCCTAGTACTCCCTCAGCCACTAAAAACACAGGCCGAACTGACATAACATTAGAAGCTGATCCCGGAGTAGAAGGTCCCGCACTT AAAACCTCGAAAGCAGTCACAGAAGAAGCATCTCAGTCTAGTGGCATTGATACTGATAAAGGGCCAGAGAAGGAAATAACAGAACCTGTGCTAGAGATAG CCAAACAACTACACAAACACCAAGTTATGCAGCAGCCAAGGATTTCAATAAAGAAACAACCACAAGATACTTCATACACAATGCACTCAGTTACTCCTCA AGTTCATCCTAGCTATGATGGAAACTATGCTCACAATGAAACCAATTCACAACCAAGGATTTCAATAAGAAGACGACCACAACAACAAGAAGGTCCATTC ACAATGCACTCAGTTAATCATCAGGCACATCCTAGCCATGGTGAAAGTTACAATCTCAAGAACAATAACCCACAGCCAAGGTTTTCAGTAGAGAGACAAA CACAAGGTACTCCACTCACAATGCACACAGTTAATTCTCAAGTTCATCCTAGCTATGGTGGAAGTTATTCTCACAACGACACAAACCAGCAGCCGGGGAT TTCGATAAAGAGACGACCACAAGCACAAAGTTCTCCGTTCACAATGCACTCAGTTAATAATCCTCAAGTCCATCCTAGCCATGATGAAAGCTACAATCTT AGGAACACCAACCCGGAGCCAAGGATTTCGACAGAGAGACAAACACAAGGTACTCCACTCACAAGGCACCCAGTTAATAATTTTCAAGTCCGTACTGATG ATGGAAACTATAATCTCAAGGACACCAACCCACAGCTTGGTGGAAGAGGGTTGATGAGTGGTAGTGAAAGATTTGCAAGCACATATGACCTTGTCGAGCA GATGTTTTATCTGTATGTACGTGTCGTGAAAGCAAAAGATCTCAAACCAGGCACTATCACCTCTAGTTGTGATCCTTATGTGGAAGTGAAGCTAGGGAAC TATAAAGGAAAGACAAAGCACTTTGAGAAGAAATCGAACCCGGAGTGGAACCAAGTCTTTGCTTTCTCCAAAGACCGCATTCAATCATCTGTTCTAGAAG TTTATGTGAAAGATAAAGAAACGCTGGGGAGAGATGACTATCTTGGAAGGGTGGTTTTTGACCTGAATGAAATTCCGACAAGAGTTCCACCAGATAGCCC ACTGGCTCCTCAATGGTATAGACTTGAGGACTGGAGAGGAGATGGTAAGGTGAGAGGTGATGTTATGCTTGCAGTTTGGATGGGAACACAAGCTGATGAA GCTTTCTCAGAAGCATGGCATTCTGATGCTGCCACTGCCTATGGAGAAGGTGTTTTCAACATCAGATCAAAGGTTTATGTATCACCAAAACTGTGGTATC TCAGGGTCGATGTCATTGAAGCTCAAGATGTCATACCTAGTGACAGAAATCGCCTGCCAGAGGTTTTTGTGAAAGCTCAAGTTGGCTGCCAAGTATTGAA AACCAAGATTTGTCCTACTAGAACAACCACGCCATTGTGGAATGAAGATTTAGTTTTTGTGACAGCAGAACCATTTGAGGAGCAATTGATCATTACTGTG GAGGATCATGTGCACCCTTCAAAAGATGAGGTGCTTGGGAAGATAAGCCTACCAATGTCCACCTTTGAGAAGCGGCTAGATCATAGGCCAGTTCATTCTC GCTGGTTCAATCTTGAGAAATTTGGTTTTGGTGTGATAGAAAATGATAGGAATAACCAGCTTAAATTTTCTAGCAAGGTTCACCTGAGAGTTTGCCTTGA AGGTGGATACCATGTCCTAGACGAATCAACATTGTACATTAGCGATCAAAGACCAACAGCAAGACAGCTATGGAAGCAGCCTATAGGGATACTTGAAGTA GGTATCTTAGGAGCACAAGGGCTTCCCCCAATGAAGATGAAGGATGGTCGTGGCAACACAGATCCATATTGTGTCGCTAAATATGGCCAGAAATGGGTCC GAACAAGAACACTTATTGATACTTTTAGTCCTAAATGGAATGAGCAATACACATGGGAGGTTTATGATCCTTGCACTGTGATAACATTGGGAGTTTTTGA CAACTGCCATTTGGGTGGAGGGGAAAAGGGTCCTGGTGGAAGAGCAGCCCGAGATACTCAAATTGGAAAGGTAAGGATTCGGCTCTCAACACTAGAAGTT CATAAGATATACACCAATTCTTATCCTCTCCTTGTTTTAAATCCGCATGGAGTCAAAAAGATGGGTGAACTTCAGCTAGCAGTGAGATTCACAACAGTGT CACTAGCTAATATGGTTTACACTTATGGACAGCCCTTGCTTCCAAAGATGCATTACTTGCATCCTTTCACAGTTAACCAAATCGACAACTTAAGGTACCA AGCCATGAATATTGTAGCTATGAGGCTTGGTAGATCTGAACCACCTCTCAGGAAAGAGGTAGTGGAGTACATGTTGGATGTTAATTCCCATGTTTGGAGC ATGAGAAGAAGCAAGGCAAACTTCTTTCGCGTCATGTCCCTTTTCTCTAGCATGATCACAATGGGTAAATGGTTCATTGATGTTTGCAATTGGAAGAACC ACATCACAACAGTTCTAGTACATATTCTTTTTCTCATACTAATATGGTACCCCGAATTGATACTTCCCACTGCGTTTCTCTACGTTTTCTTGATCGGTCT GTGGAACTATAGGTATCGTCCTAGACACCCACCTCACATGGATACTAAACTCTCATGGGCAGAAGCTGTCCACCCGGATGAACTCGACGAAGAGTTCGAC ACATTCCCAACTTCCAGATCACATGATGTAGTGAGAATGAGGTATGACAGGCTCAGAAGTGTTGCGGGTAGGATCCAGACCGTTGTCGGAGACATAGCTA CACAGGGAGAGAGATTCCAATCTCTACTGAGTTGGAGAGACCCTAGAGCAACTAGCCTCTTTCTAGTATTTAGCTTTTGTGCAGCTTTGGTTCTCTATGC AGTGCCATTCAGGGTGGTGACTTTGGTAGCAGGTCTGTATTATTTGAGGCATCCAAAGTTTCGGAGCAAGCTACCTTCTGTACCTAGTAATTTCTTCAAG AGACTATCAGCTAGAACAGATAGTTTACTATAAATCTGTTTCTTTTCCTCCAAATAAGTTTACTATAATTCTGTTACACATACGTTCTGCATGTTATACA AACTACAGTTTGTATTTTACTCATTTCCTTCTTTTCAATTCAAGATACTCATCAAGTTCTATCTCCTACTGAAGATACTAGATTGAGATTGTGCATCAAC AACTT
• Tissue: pods
• Gene name: LI_gene_150873;
• Additional information: details;

Expression of Ll_transcript_384058

FPKM

• PAB: 0.1
• PNAB: 0.2
• PS1: 0.4
• PS2: 0.2
• PS3: 0.3
• PW1: 0.5
• PW2: 0.4
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_384058

• Blastp: FT-interacting protein 1 from Arabidopsis with 73.38% of identity
• Blastx: FT-interacting protein 1 from Arabidopsis with 73.38% of identity
• Eggnog: Multiple C2 and transmembrane domain-containing protein(ENOG410XRQN)
• Kegg: Link to kegg annotations (AT5G06850)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019451242.1)
• Pfam: C2 domain (PF00168.29)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;