| Id Trinity | TRINITY_DN47237_c3_g3_i9 |
|---|---|
| Name Transcript | Ll_transcript_385525 |
| Sequence | GTTTGTGGCAGCGGAATTTGAGCTTAGTCACATTTATATCACACACAATCTTCTTTCTCTATCTCTCTCCACTAGGGTTTTAGCTTCTTCACTATCTCTT TCAATGAGCAGCAACAACGATGCACTCAATGTTTCAGATCTCACAGCTGCTCTGAATGAAGAGAATAGAGCTGACCTAGTCAACGCTCTCAAGAGCAAGA TACAAAGTTTGGCAGGGCATCATTCTGATATTCTGGAGTCTCTCTCACCTGTTGTGAGAAAGCGTGTTGATGTTCTCAGAGAGATTCAGGGTCAGCATGA TGAGATAGAGGCCAAGTTTTTTGAGGAAAGAGCAGCTCTTGAGGCCAAATACCAAAAATTGTACCAACCACTGTATACAAAGCGCTATGAAATAGTAAAT GGTGTTACAGAAGTTGAAGGGGCCGGAAATGAAACAAAAGCTGATACCCAAGAGGATGAAGGTACTGTTTACTAATACACATGTTTTTTCTCTTATCAGT TTCCCAATTACTCGCTATAACTATGTTTTCGTGTAGAGAAAGGAGTGCCTGGTTTTTGGCTTACCGCAATGAAAAATAATGAAGTGTTAGCTGAAGAGGT CTGACAGTTGTGTTCATTATTAGGCCTTTTTATTTTTATTTTAATGCTATGCATGTTTGCAGCGTAGTCTGAGTCTCATGTTCACTAATTATCTCACTTG CTTATGAAAAAATAGATTTCTGAGCGTGATGAAGCTGCTCTTAATTTTCTCAAAGATATCAAGTGGAGCAGGATAGAAAACCCCAAAGGATTTAAGCTTG AATTTTTCTTTGATTCTAATCCTTATTTTCCAAACTCTGTCTTGACTAAGACATATCATATGATTGATGAGGATGAACCAATATTGGAGAAAGCAATTGG GTTAGCTTGTTGATCTTATCACCTTGTCTTTGTTTGCGATATCTTTAAATGGTTGCCTTTTTTGTCAAATAAGTTTTGCTTGCTATATTTTCCTTGCAGG ACTGAAATTCAATGGCTCCCAGGAAAATGCTTGACACAAAAGGTTCTTAAGAAAAAGCCCAAGAAGGGTTCAAAAAATGCTAAACCAATCACCAAAACTG AAGATTGTGAGAGTTTCTTCAATTTCTTCAACCCACCACAAGTCCCTGACGATGATGATGATATTGATGAGGATACGGCTGAGGAACTTCAGAATCAGAT GGAACAAGACTATGACATTGGGTCAACAATAAGAGACAAGATTATCCCTCATGCTGTATCATGGTTTACTGGTGAGGCCATTGAGGGAGAGGAGTTTGAC CTGGAGGATGAAGATGAAGATGATGATGTTGAAGAGGATGATGACGAGGAGGAGGAAGAGGATGATGAAGATGACGATGAAGATGAGGAAGAAAGCAAGA GTAAAAAGAAGGTATAATATTAATTGCTTGAAGTGTTTCATCATAGGTTGTTTCCTATCTGAGGTTTTAATCTAACTGAACCTTCTTTTGTTACTCATCT TTTGTGTGGCCTCAATTTCGTTGAATTGCTGCTGCAGTCATCTGGACAAAAGGTAAAATAGTTTGATTTTGTTATCTAAATGAAATAGCTTGTATCATTG ATTTAGACACACAATATCTCATCCTTGATATATATATGCCTTTTCTTTTAAATCTGTTGGCTTAGTGATGCTGGATTGTTGGTGCAGTTATTTATTCTTT CTCATGTCGTGTTTGAAACTTACATGCATGATTTTCATGTTTATTCAGAAGAGTGGAAGAGCACAGCTTGGTGATGGTCAGCAAGGTGAGCGTCCTCCGG AGTGC BLAST |
| Tissue | pods |
| Gene name | LI_gene_150975; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_385525
| Blastp | Nucleosome assembly protein 1;2 from Arabidopsis with 73.73% of identity |
|---|---|
| Blastx | Nucleosome assembly protein 1;2 from Nicotiana with 61.46% of identity |
| Eggnog | nucleosome assembly(ENOG410XQN9) |
| Kegg | Link to kegg annotations (AT2G19480) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019442976.1) |
| Pfam | Nucleosome assembly protein (NAP) (PF00956.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |