| Id Trinity | TRINITY_DN47239_c2_g2_i4 |
|---|---|
| Name Transcript | Ll_transcript_385288 |
| Sequence | ATCGAAGTAAGTCAAATTTGATATCTTTAAGGTGGTCTGCATGAGAGACTCACATTTAGTAGGACCCGGAGATGATAGATATACACAATCTTACTCCCGA TATTTCTAAGTATGCATGAATGGTCCTACTATGACACATACTATATAAGAATTATTGAGATACAAACATACACAAATGAGAGAGATAAAGATGAGTAGGA GGTTGAGATATTGTTACAATGAAGTAGCTCCATTTTGTGCATTGATAATAGTGCAATTCACTGAAGTTGGTGTCAACATTTTATTCAAGGAAGCTACCAA TAAAGGGTTGAGTTACTATGTCTTCATCTTTTATTCATTTGCTATCTCAACTCTCATTCTGCTTCTACCTTTACCCTTCATAGCCCTCAGGTTAAATGGG CTTCCTTCATTCAATTTTTCTCTTATCTGCAAAGTTTTCTCTTTGGGACTTCTTGTATTTTCAGCTCAGGTTTGTGGATATAAAGGGATTGACTATAGTT CACCATCTGTTGCTTCAGCTGTGAGCAATTTGCTTCCAGCTTTTATCTTCATACTTGCTGTCTTTTTCAGGATGGAAAAGGTAAATTTAAGAAGTTCAAG CACTAAGGCAAAAATCATGGGTTCAATAACATCAATAGCTGGTGCATTTGTAGTTGTTCTCTATAAAGGACCTACAATCTTGAATGCTGCATCTCCATCA CAACCTCCTTCACTCGATTCTCCACTCGGCTCTTCACAAAGGAATTGGATTCTCGGCGGCTTTCTACTCACGGTTGCATATATTCTAATGTCAATCTGGT ACATTTTGCTGACTCATGTTATCAAATTGTATCCGTCGGAGTTTATCGTGACCTTCTTATGCAACTTTTGTGCGACTATTATAGCGGCCCCGGTATGTTT TCTAGCTGAAGCAAACTTGGGTGCTTGGAAACTAAAACCTGATATAACACTGGTGGCTGTTATATACTCTGTAAGCATTACCAACCTGTGTATTTTCTGC AACAAATATGTCAATGAAGTATTGTGATACAAAAATTATCATCCCATACTACATTTTACATAAGTTTATCACACTTAGTTAACAATGTATAAGTCCATGG TTAATCACATGCATAGAATGCGTAAAGGGCTAACCGTTAACAATGAATGTACTTGAATTAACAACTTATTAACCAATCCGTTACCCGTAAACATGATAAA CCCAAAATTTATAGATCATTATATAAGTCCATGGTTAATCACATGTATAGAATGCGTAACGGGTTAGCCATTAACAATGAATGTACTTACTGAATGAACA ACTTATTAACCGATCCGTTACCCGTAAACATGATAAACCACAAATTTATAGATTGTTAATCAGGCGAAACTAAGTAGTTTGCGAATAGCCGAAAATAGAG TTGATTTCAGTAACATGTTAAAAGTGTAATTTTTGCAGGCATTCTTTAGCACAATTATCAGCACTGTTATTCACACATGGAGCCTCCATATGAAAGGTCC TGTATATGTATCAATCTTTAACCCCTTATCAATTGCCATAGCTGCTGCTATGAGTGTCATATTCCTTGGTGAAGCTTTGTATCTAGGAAGTGTTGTTGGA GCAATAGTACTCTCTATTGGGTTTTATGCTGTTATATGGGGAAAAGCAAAAGAAGAATTGATTGAGGATGATGACAACTTAACCTTGAGATTTCAATCAA ATAGTATGGATCCTTTGTTGCAAAGATGCAAAAGGGAAGAAACGTAAGTTAACAGCCAGTGAAATCATGATATGTGTCATGTTTCATCATTTTTTATAAA ATTATTTCTGAAATTAAATAAAATAGTACACGTGTCATACTTTTACTAGTCGGAAGAGAGAAGTTATCTCATGATACGAGGAGATACATTATTCAAGTTG ATGTATGTGTATATGGAGTAGTGCTATTTCACCATGACATTGATGGTTATCTATAGTTTTCATTGTGATTTTTGTTCCTTGTGTTATTTCACCATTACTA CCAAGAAAAAATGTTAAGAAACTGCTATTTGGTTATCACATAAAACCAATGGTTTTTCTTGCTTTTGATGCAAGCCTTCAAGAAAATTTTCTTAGCAGGA GCTGCAACAGAAATTCATGTAATTACAATTCATGTGATGATAATAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_151005; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_385288
| Blastp | WAT1-related protein At5g40240 from Arabidopsis with 52.79% of identity |
|---|---|
| Blastx | WAT1-related protein At5g40240 from Arabidopsis with 50.93% of identity |
| Eggnog | EamA-like transporter family(ENOG4111BCK) |
| Kegg | Link to kegg annotations (AT5G40240) |
| CantataDB | Link to cantataDB annotations (CNT0001375) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019433717.1) |
| Pfam | EamA-like transporter family (PF00892.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |