| Id Trinity | TRINITY_DN47240_c1_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_384669 |
| Sequence | ATTTTGGTGATCCTCAAGCTTTAAGTTCAAGTAATTGAAAGTTTCTAGTATGCTTGTATAATTGATTAAAATACCAACTTGTTTCATTTCTCATCCTACT CAGTTTCCTACCTCTCACTTTTTTTCTGCTATCATGCTTCATTTGTGTACAATACCCCGAAAAACTAATGTGTTCCTCTCATATTCTCTTTTCAATATCC CCTTCTTGGTTTTGATATAGACACAATTTTCAGGGTTAACTAGTGCCTTTGATAATGTTGATTATTTCGAAATTTGAAGGTATCATTTATTCGCTTGGAC CTCTAGATTATGTTGTTTGAACTTTGAATAACCACTTTGTGCATCTGTATTCTTGTTCAGTTGAAAATGAGGACGGCGGTGAAGATATTCCTGAAGAAGA AGCTGTTTGTAGAATTTGTATGATTGAATTGGGAGAAGGTACTAATACTCTTAAATTGGAGTGCAGCTGCAAAGGTGAACTATCATTTGCGCACCGAGAA TGCGCAGTTAAATGGTTTAGCATTAAAGGTAATAGAATTTGTGATGTGTGCAAGCAAGAAGTTCAGAATCTACCGGTCACTCTTTTACGAATTCAAACTG TTCGGGGGCACAGAGACCAGGAAGATGAGATTTCTCAACACAGATTTTGGCAGGATGGTTCCATTCTTATCATTGTCAACACACTGGCCTACTTTTGCTT TCTTGAGCAGCTTCTGGTTTCAAAAATGGGATCTAGTGTAGTTGTAATGCCACTCCCTTTTTCTTGTATACTAGGTCTTCTTGCAAGCGTGGCAGCTAGA ACAATGGTGAGGAGAAAAGATGTTTGCGTTTATGCAACTGTTCAGTTTGCTCTGGTGGTTCTGGCTGGACAGATTTTCTATTCATTGATTCATATGCCAG CTGTTCTAGCTATCCTACTTGGTACAGTCACTGGCTTTGCAATTGTAATGTGTGGAGCTTCTATACTTGCTGTGATTTTGAAGTGGAATCAACAGCATGA TTCCCAGCAGGCGGTACTTCCCGATCAATCATCATCGGCAGCAGTTCATCAACCCCATATTGATTCTGATCACCCTGAGTAATTTAGGAGACTCTCCTGC AATTGTGAGCTGAAAGAATATTGTCCATCGTATTTACTTTAAGGATGGCATCATTAGGTGTTTGGTTGTACATAATGTATAGACAAGTTTGAGCACATTA CATTATACCTCTCCTTTTTCAAGCAATGATACAGAGGTTGAGAAAATGAGGATCACATCTTTTGTCCAAATATGTGTACCACTCCATGTACCCTTTTATT CTTATGGGTCGAAAATGTAAATTTATATATTTAATTCATATCCCAAAAACAAAAGGTTGATTATTCTTTTTATTTTGATATGTATACATATATATTTAGT TGATTGCCCTATGAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_151015; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_384669
| Blastp | - |
|---|---|
| Blastx | Probable E3 ubiquitin ligase SUD1 from Arabidopsis with 37.93% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019432271.1) |
| Pfam | RING-variant domain (PF12906.6) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |