| Id Trinity | TRINITY_DN47240_c2_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_384708 |
| Sequence | CTCCATATTAAAATCTGGTTGAACAAAAACAATTAACTGATGTTACACATCCTCTAATTTGTTATCTCCATTATTAAATTGGATTCAAATTTGTTCTTAA AGTTTCATGTTAATTTTAATTAAAAAAATTCAAGATCCATGGATCATATTTTTCACTCATTCCATCCAAATCCAAATCACAAATAGAAAGTGCTCATTTT TCATCAATCAATCACAATTTCTGTGGAAAAATCAAATGATCCTTTTCTCTGTGAGACCTTTCTTCACTTTTCTCATTCTCACTCTTTCTCTCCTTCTCTT TCTGGCATTTCTAATTCCTCCTTCTTCCCTTTTCTCCCAAAATCAACAACCTTCACTGTAAGTTCTCAACTTCATTTCCCATCATTTTTTTTTCCTATTT TAACTTTGGATCTACCAAAAAGTTTTGATTTTGGGAACTGGGTATCTTCAATTTTTGAATTTTAATGATATATGAATTTGGTGTGTTTGTGAAGAGGGGA AGATGATATATGGAGTGTGAAGAGAGTTATGGAATGGAGACCTTGCAATTGGTGGCTCCAAGGGCATCAAACAGGTACATGTTTCTTTGGAGGTTCAAAT TTTGGTTTTTTTAGTTGAATGAAATTTTTTTGTACTACTAAGGGTATCCATCGTAGGGTAACTAACTAATCCATTTTGGGGTTTATGGTTGTCCCTCCCG ACAACTGTCACTCACACGAATCAAATATTTCACTTTTTGGTCATTCTGGTGATCTATTAGGGTCTTACGCTACTAGACCAATGCCTTGTGAATGAACTTT TGTGGTTACTTATATAAGTTATATTCATTTAGTGTCTCATAGGGATTACTATAATTGTTCATGGTAATTAAGTATGGCAAACGCTAACCATTGCCCACTC TTCAAGGAATTAAATAAGGCAAGATTTTATTGGCAAATGGTGCTAAGAAGTAGAGTATTTAGTGGGTGTTTGGTAGAGCTTATAAGAATAGCTTATGAAA ATAAGCTTGATGAAATAGTTTATGACCTTTTATAAGCTCTTGTTAGCTTACTTCAGTGAAGCGTATCCGAAAAATTTATGAAAATAATTCATTTTAGCTT ATGTCAAAAAATCTTATTGAATAAGTGCTTAATTAAGCTATTTAAAATGACCTTAGTTTTCCAATAAAAACTTATTTTTTATTGATTCGGAAAGACCCTT AATTTTGGAGATTATATAGAATGGCAATAGCTTATACTTGGATATCACAAACTCAGTAAATAATTAGAGTTCAGGGCATAGGTTTGGGGCGTTCGGCTTT TCATTGTTATTAGAATTTGGAAGTGCAAATGTGGAACTCTAAGAATTCTGAATTTTGATAATACAATTGCAATGAGATGAGGTCAAGTTGTGCTAAGGTG AGGGTAGCTGATTTGCATTTTATTTTCCGAGTCAACCTTAATTGGCTTTCATTGCAGACAATTGCTTTCGTTTTTATAGTTTTGTTCTTGAAATGCTGCA GCTCCGCCGTTACAAACAAATGGATATATCAGAGTGGATTGTTATGGAGGCCTCAACCAGATGCGAAGAGATTTCTGTGATGGTGTGGGCATTGCGCGTC TGTTAAATGCAACCCTCGTGTTGCCAAAGTTTGAAGTAGCTACATATTGGAATGAAACAAGTGGTTTTGCAGATGTATATGACGTAGACTACTTTATTAA AAATATGAATGGCTTTGTCAAAGTTGTCAAAGAATTACCACCAGAGATTGCATCAAAAGAACCTGTTCGAGTGGACTGTAGCAAACGGAAAGGTCAATTT GATTATGTTGAAAGTATTCTTCCATCTCTGTTAGAACACAAATACATTTCTATCACTCCGGCAATGTCCCAAAGAAGAGACAGATATCCTTTGTATGCAA AAGCTGCTCTATGTCAAGCCTGTTACAAGGCTTTACGTCTAACAAGATCCTTGGAAATGAAAGCATCAAAGCTTCTAGACGCAATACCTAAACCTTTTTT GTCTCTTCATCTTCGTTTTGAGCCGGACATGGTTGCTTACAGCCAGTGCGAGTACCCTGGCCTGTCTCCTGCCTCATTGAAAGCCATAGAAGTGGCACAC GGACAACTAATGGCGGAGAGAAAACCATGGACCGGAGAGTTAGCTCGCATTTGGAGACAACGAGGGAAATGTCCCCTTACACCTAACGAGACAGCTCTAA TACTCCAAGCCCTTTCCATCTCATCAACGACAAACATATACCTTGCGGCCGGAGATGGTTTGATGGAAATGGAAGGGTTAACATATACCTACTCAAACAT ATTCACAAAGTCTAGTCTTCTAAGTGGTGAAGAGTTCACAAGCATGCATGGTAATACAAAAGCTGCTTTGGATTACTATGTATCTATTAATAGTGATTCA TATATTGCTACATATTTTGGGAACATGGATAAGATGGTTTCAGCAATGAGAGCTTTCAAAGGGTTGTATAAAACTCTATTTTTGAGCAGAAGAGGTTTTG CAGAATTAACCTCACAGGGTTTGAAGGGAAAGGAATTGATGCAAGCCTTGTGGAAGCTTCATAGAGATGATTTTGTTATGGGCAGAGGTTCTGCTCTATC TGAGTGTTTTTGTGAATTCAAGTTGTGATTATGGATTCATTCACTTTTTGGCATATTTATTTAGGAGACGGGATCCCCTTACTTCACGAGTAAGTTAAAA AACTACTCCACATCTTAGCCATCCGTTCTATTCGTAACTATTCTTTTGTATTGTATTGATGTTATGTAATTTTCCACTCATGAATGTTGGGATACATTTA GTGAATTGAGATGAGTGTTGTACAAGGAAATACAAATCTTGTTATGATCCAAATTTTGGTTGAAGAGAAGAGATTTTTAGTGCCTTGTCCTTTCCATATT AGAGAGTAGAAGTAGAAGGTAATATTTATGCATTGTCAGTGTAAAGATTTATACATAATGAATACATCATCCACAATCATTTGTATTACTTTTTTCGAAA AGTCAATA BLAST |
| Tissue | pods |
| Gene name | LI_gene_151017; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_384708
| Blastp | Uncharacterized protein At1g04910 from Arabidopsis with 30.09% of identity |
|---|---|
| Blastx | Uncharacterized protein At1g04910 from Arabidopsis with 32.03% of identity |
| Eggnog | DUF246 domain-containing protein(ENOG410Z25U) |
| Kegg | Link to kegg annotations (AT1G04910) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019456657.1) |
| Pfam | GDP-fucose protein O-fucosyltransferase (PF10250.8) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |