Ll_transcript_385552

• Id Trinity: TRINITY_DN47247_c0_g1_i9
• Name Transcript: Ll_transcript_385552
• Sequence: CTCCCCTGGATTACAGTCAACAACACCTCACATGTTCTGCAAGACTCTGACTGCTTCTGATACCAGCACTCATGGAGGATTTTCTGTTCCTCGTCGAGCA GCTGAAGATTGCTTCCCTCCCCTGGATTACAGTCAACAAAGACCTTCACAAGAGCTTGTGGCGAAGGATCTGCATGGCCTAGAATGGAAGTTTCGACATA TATACCGGGGTCAGCCACGGAGGCATTTGCTCACAACTGGGTGGAGCGCGTTCGTGAACAAGAAGAAGCTTGTGTCTGGCGATGCCGTGTTATTTCTGAG GGGTGAGGATGGAGAACTGAGATTAGGGATTCGTAGGGCAGCTCAACTGAAGAGTGGAACATTTGCAGTTCCCTCCAGTCAGCAATTGAATCCTAGCACT CTCATGGATGTTGCTAATGCTTTGTCTACACGATGTGCCTTTCGTGTTTGCTATAATCCAAGGGTCAGCTCATCAGAATTTATCATACCACTCCACAAAT TCTCAAAGAGCCTTGATTGTTCTTATTCAGTTGGTATGAGGTTCAGGATGCGCTTTGAAACTGAAGATGCAGCAGAGCGAAGATTCACAGGATTAATTGC TGGAATTAGTGATGTAGATCCTGTTCGATGGCCTGGATCAAAATGGAGATGCCTACTGGTAAGGTGGGATGACATGGAAGCTGCTAGGCATAATAGGGTT TCCCCATGGGAAATTGAGCCATCTGGTTCTGCTTCCACTACCAGTAACTTGATGGCTGCTAGTTTGAAGAGGAGCAGAATAGGATTGAGTTCAGAGAAGC TAGAATTTCCAGTTCCGAATGGGATTGGAGCCTCAGACTTTGGGGAATCATCAAGATTCCGGAAGGTCTTGCAAGGTCAAGAAATGTCCGGTGTTAATAC TCCCTTTGATGGCATAAATGCTCAGAGTCCCCGGTTATCTGAGTTAGGGAGATACTATCCTGGTTCAAACTGTACCGGGTTTGCTGCAACAGGAAATAAT GTCAGAATCCCACAGGTGAGTTCTGATTTTTCCTGCAACGGCATAGGCTTCAGTGGATCTTATGGATTCCAGAAGGTCTTGCAAGGTCAAGAAATACTTC CAAGCCAACCATATGGACGAGCCTTGTCTATGGACGAGGCTCGCGGAAATGGTCGCTTTGGACTCTTTGATGGTTATCATCATCCAATGCTTAGCTCCAG AAATGGATGGTCTGCTCAGATGCATGATAACGCTTCACATTTGCATGCATCGGTTCAACCAGGGCAAGTGTCATCTCCATCCTCTGTGTTGATGTTCCAG CAAGCAGTCAATCCAGTTTTCAACGCAGACTATAATAACAAACACAACCAAGCGGGTAATATCCATTTCCACAGTTCATATGCTACTAAAGTGAAAGGTG GAGTTTCTGCAATTTCCCCATCTATTGAGCCTATTTACTCCGGGCATGCTCAGGAAGCCACAAATTCTTTCGGTATGTTTAGTCAGCATAGCCAGTTGGG TGGGTCTCGGTCATATGAATCAGTGCAGGCACTTAGAGGCAGTCAAGAGATGGCTTCCTCACGTAAAAGTAGCTGCAGACTCTTTGGTTTTTCGTTAACT GAAGACCGAAACCTTGCAAATAAAGAAGCTGATCCTTCTTCAGTCACTTGTCAATTTAATTCTGGACCTCCCTTTGCTAGACCTATTGAAGATGAGTTTC ACCCTGGCCGTGCTCTCGGGAATAAGGCGGTTGGAAGTAACTGCACTAATGGTGTGTTGCAGTATTAAGAATCATGATGTGTGTTAGCTGTATGACACTG GCATGAAGTGGCTGAAGAAGTGTGCATACTTGCTCTAGTTAATGTGCTTGCTATAATATCTTAAGGATTTCAAGAAGAAAAATTGTTAACTTTCTGCCAA ATTTGGATAATGTTATTTTAAGTTGGCGATGACCACATAAAGTGTTGTATTATTAATCTTATATGCATGCTGATCTATAAGAGATGCATACTCTGCAGGT ACGGCAAAACTATGCAATAGTGAGATTTCTCTAGCCTTTAATGTGACATCTATTGTTGATGATAAATCCACTCTCATAAGCATGATTATTGGGATATGTA GTTAATCTTGTTCTTATCAACAAGTATATGGTATTTTAAACTATGTTCCAAATTTTTTCTCG
• Tissue: pods
• Gene name: LI_gene_151084;
• Additional information: details;

Expression of Ll_transcript_385552

FPKM

• PAB: 3.7
• PNAB: 11.4
• PS1: 20
• PS2: 16.7
• PS3: 26.8
• PW1: 5.5
• PW2: 4.8
• PW3: 6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_385552

• Blastp: Auxin response factor 3 from Arabidopsis with 59.78% of identity
• Blastx: Auxin response factor 3 from Arabidopsis with 59.89% of identity
• Eggnog: auxin response factor(ENOG410YC80)
• Kegg: Link to kegg annotations (AT2G33860)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019425913.1)
• Pfam: B3 DNA binding domain (PF02362.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;