| Id Trinity | TRINITY_DN47250_c1_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_384963 |
| Sequence | CTTGGGACATCACGAGGTGGGCATGACACTAGCAAGATTGTTGACAGCATCCAGGATCGTGGAATCAATCAGGTTTACTATGTCAACTGTTTTTCAAATG AAGCTTCCATGAAGATGAATGTTGGAAGCATAAGTTTGGAATTTTTATATCATATACTTAAACGTGGGTAGGGTTGGTTATAGTCATGGCATGGGTTTTC ATTGTTTGGGTTATGGTTACAGGTTTATATTATTGGAGGTGATGGAACACTGAGAGGAGCGTCTGTGATTTATGAGGAAGTTAAACGGAGGGGTCTGAAA GTAGCAATCGCTGGGATTCCTAAAACCATAGATAATGACATCCCGGTGATTGACAGGTCCTTTGGTTTTGATTCTGCGGTTGAGGAGGCTCAACGTGCCA TTAATGCAGCACATGTTGAAGCTGAAAGTGTTGAGAATGGCATTGGTGTTGTAAAGCTAATGGGGCGTTATAGTGGATTTATTGCAATGTATGCTACTCT TGCTAGTAGGGATGTAGATTGTTGCTTGATTCCAGAGTCACCCTTCTACCTCGAAGGAAAGGGTGGACTTTTTGAATTTATTGAAAAAAGGCTGAGAGAA AATGAACATATGGTTATAGTCATAGCCGAGGGAGCAGGACAAGATCTGTTCACCGAACACATGCGAGACATGAGCCAGAAGGATGCTTCTGGAAACAAGC TACTGCAGGATGTTGGTCTATGGATATCCCATCGGATCAAGGATTATTTTGCAAGGACAAATAAGATGTCCATCACTCTTAAATATATAGATCCAACTTA CATGGTCCGGGCAATTCCTAGCAATGCATCGGACAATGTCTACTGCACACTTCTTGCTCAGAGTGCAGTTCATGGAGCAATGGCTGGGTACACTGGATTT ACAAGTGGGCTGGTTAATGGCAGACATACTTATATTCCATTTAGCAGAATAATTGAGAGGCAGAACAAGGTCGTGATCACCGACAGAATGTGGGCAAGAC TCCTTTCATCAACCAACCAGCCAAGTTTTTTGAACCTCAAAGATATCGAAGACGCGAACAAACCAGAACAACCTCCCACGCAATTGTTAGAAGGGAAGAA ATGCGAAAATCTGGATGAAGTTAGATCAGAAACTCCTTCTCAGGTTTTAGAAGAGGATAATAGCAAAGAAGAATCAGGAAACAAAGCTGAAAATCTGGAT GAAGTTAGATCAGAAACTCCCTCTCAGTTGTTAGAAGAGGATAATAGCAAAGAAGAATCAGGAAACGACCCTGACCAGAGTATGGAGACATAAAATTAAA TACTGTCGTGTTTATCTCCATGTTCACCTTGACGGCCAAAAGTACCATCTGTCCACTTTTTACATGTATTGCAAGTTGGTACTCGTATAGAAACCAGGTT ATTAAGAATGACAGAACTATTTTTTCTGATAACTAGGTATGCAATAAATTTTGAAAAAATATTTTACCTTCTTTTAATGTTCCATTATATATATATATGT GTGTATATATATATGTATATATATATGTATATAATGGAGCAGTTTGGGAATAACTGATTTTATCCATGGAGTCAGGTTTTTAGTTGAAATTGAATAAACC TCAAATTAGTTAGCCTAGTCATATGTATCTTTTCCAACTTTCACACATAATTCTACAATTGGGTGATTTGATAGCTAATAACTCGACATATGTAATTGTG TATAAAGTGTTTTGATTTTAGGTATGTATTAAGACCTTCTCTATTTTGTGAACATGGATACATAGTAAGTTCAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_151108; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_384963
| Blastp | ATP-dependent 6-phosphofructokinase 6 from Arabidopsis with 84.9% of identity |
|---|---|
| Blastx | ATP-dependent 6-phosphofructokinase 3 from Arabidopsis with 69.52% of identity |
| Eggnog | phosphohexokinase(COG0205) |
| Kegg | Link to kegg annotations (AT4G32840) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019438445.1) |
| Pfam | Phosphofructokinase (PF00365.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |