| Id Trinity | TRINITY_DN47265_c0_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_383504 |
| Sequence | ATTCTTTCCTCATTACTCACTCTCTTTTCTTATTCTCCTTTTAGCTGCTGCTGCTGTTCAGCTTCTCTTTCTGTATTCATTTCAATCTTCAAACATGATG TTGGGTGTTCTAAGGCACAACAAGAGTATTGTTCGTCCCGCTTTCAGAGCTTTCTCTTCTGCTAATCAGATGACAGTGAGAGAGGCTCTGAACTCTGCTC TGGATGAGGAAATGTCTGCTGATCCTAAAGTGTTGTTGTTGGGTGAAGAGGTTGGCGAATATCAGGGTGCTTACAAGATATCAAAGGGGTTGCTCGATAA GTATGGCCCTGAAAGAGTTCTCGACACTCCAATTACTGAGGCTGGCTTTGCTGGGATTGGAGTTGGTGCTGCTTACTATGGTCTAAAGCCTGTTGTCGAG TTTATGACTTTTAACTTCTCCATGCAGGCAATAGATCACATCATCAATTCTGCTGCAAAATCAAACTACATGTCCGCTGGGCAAATATCTGTACCTATTG TATTTAGAGGGCCCAATGGTGCTGCTGCTGGGGTTGGTGCTCAGCACTCTCAAGTATGGTTCTTCTCTCACTATATTCTTTTATGTAAAATATTTTTTTA ACTAGTTGTGTCCATTCCCTCTTGAATTTAATCTGATTATAATGTTGCCATTGAGTACAAATAGTTTTAGGTTTTGTCACTAGTCACTTTGCTTTTGATG CAGTGTTATGCGGCCTGGTACGCCTCTTGCCCTGGATTGAAGGTCTTGACACCATATTCAGCTGAAGATGCACGCGGTTTACTTAAAGCTGCTATAAGGG ACCCTGATCCTGTTGTTTTCCTGGAAAACGAGCTGTTATATGGTGAGTCATTCCCTGTTTCAGCTGAAGTTCTCGATTCCAGTTTCTGCCTTCCCATAGG AAAAGCTAAGATTGAGAGAGAAGGAAAAGATGTGACTATTACAGCCTTCTCAAAAATGGTTGGCTATGCTCTAAAGGCTGCTGAAATACTGGAAAAGGAA GGAATCAGTGCAGAGGTTATAAATTTGCGTTCGATCAGGCCACTTGATAGATCCACAATCAATGCTTCAGTCCGGAAAACCAACAGACTGGTTACAGTTG AAGAAGGGTTTCCTCAGCATGGTGTCGGTGCTGAAATCTGCGCATCTGTCATTGAGGAGAGTTTTGCGTATCTTGATGCACCAGTTGAGAGAATTGCTGG GGCTGATGTTCCTACGCCTTATGCAGCCAATCTGGAGAGATTGGCTTTCCCTCAGGTTGAAGATATTGTTCGTGCTGCAAAGAGAGCATGCTACAGATCT GTGCAAGTGGCTGCGACTGCTTAATTTTGTTTTACTGTCTTGGTTAGTTCATTGGTAATACTTGATGTTACCAAAAACATTGCCCCCCCCCCCCCCCCAA AAAATTTCACCATAAAACAGCAAAAAGAAATTGCAACCACAAAATGCTGGTTTTGCTCATGGATTAGTCCTTGTTTAAAAGATTCTGATGTATGCATAAT GCTCTACCTAAAGATTCAGGAGTTACAGATGCTATACATTTTTTACCCTTCTCAGCACATCTGAGAGGAACTTTGTATTTAATAACTTGGATTACATTGA CACAAGGCTGCAAGTTGTGTTTTTTTGGGTTTGTACTGAACAATAACTAAGTTAACTTTCTGAATACATTATTGTTTTTTTGGGTTTGGCTCACTACCTC T BLAST |
| Tissue | pods |
| Gene name | LI_gene_151232; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_383504
| Blastp | Pyruvate dehydrogenase E1 component subunit beta-1, mitochondrial from Oryza sativa with 91.79% of identity |
|---|---|
| Blastx | Pyruvate dehydrogenase E1 component subunit beta-1, mitochondrial from Oryza sativa with 80.26% of identity |
| Eggnog | Dehydrogenase, E1 component(COG0022) |
| Kegg | Link to kegg annotations (4346159) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019430832.1) |
| Pfam | Transketolase, pyrimidine binding domain (PF02779.23) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |