| Id Trinity | TRINITY_DN47268_c4_g1_i7 |
|---|---|
| Name Transcript | Ll_transcript_383638 |
| Sequence | CAACAATAGTAGAGTTTCTCCTCTTGTTACTAATAATAGTAGTAACATGGAAATCATGGAAAGTGAGATCAATACAGACACAACAAGATACTCCTCAGCA TCATCCTCAGTGGAAGGCTATAGTAACATGATGAGGAACTACAAAGCTCCTTCGTTTCATGCAGCAACTCCAACAGCTTCTTCAGAAGCAAGTTGGAACA GCCAAATCGGTTTGCTATCTCACCCTAAAGGTGCAATCCCAGTTTCAATGATGGACACTACAAACCATTCTTCAAACCCTCCTGATCCTAACAACAAAGT TATAACATCTTTTTCCAAACCCATTTGGTTCTTAAGGAAAAAATGCCCATGCAGTGGGAAAAAATCAGTTCAGGTCAAAGAACCCAAAATTACCCAAATG CCACTGCCACAAACACAAAAAGATCATCATTCTTTGAACCTTAAAATACAACAAGACACTGACCTTACCCTTAAGAATAATATTATCCCCATCACACCAA ACAACTGGGTTGTAGCAACTACCAAGCCTCAAAGGTTTCATAATTCTCAGTCTCACCAAGTTGTTACCTCATCAAGTGGCTTCACTTTCCCTGTGCTAAA CCTAAACCCGAACTCATCAACCACCAAAACCGACATAAAACTTCACGTCCCAAATGGTGTCAATTTAGATAAAGAATTAAGTCCGGCACGTGATTCCTTG GAAGTGTTTCAACCATCTACTAATAACGACACAATGAAATTAGCCACGGTTTCTCCAAGCACTTCCCCAGTGAATAACAATGGCATGTTAAATGAGGATG CAGAGAGTGATGCTAGTTCCGATCTCTTCGAGATCGAGACCTTCTCTACTGCTACTGCTACGCAATCATCATACCCTTCTGCTATGTATCGCCGTAGAGA CTCAATGGATGATGCTTCTTCCAACAATGGTTTTTTCTTTTGTCGAAGGAGCATGGATGAGAGATCAACCGCGGCCACCGAGTGCTACGAGCCGAGTGAG GCTAGTATCGAGTGGAGCGTGACCACTGCGGCGGCGGAGGAGGAGAGCATTGGGGTCGAGGCGGTTCAAAGTAACTGCGGTGGTGAGAAGTGGAAGAAGA AGGGGTCATTGGTGAGCTGCCGGAGTGAGAAGGCGGTGAGCGTAGGGCCGCAGGCGGTGATGAGAGCAGTGGAGGGACAGAGAGGGGCCACTTGTTCTTC AAAGCCTCCGCTTGCCAGGTCAAAGAACAACACACGTAGCTTGTCTCTTCCTTCACGGAGATAGAAAAGGAAAGAGGCTTTACACATATTTTTACAGTTG AAATTGAGGATCAGCTGTCCAACGCATGTTCCAACCATGTAACAAACTAATTAGAATGAAGAAAAAATAAAAAAATATTTAATTTTTTTAATTGACATGA TTTTTTTATTGATTTATTATAATGTTGACAATTGATCCATGTATAATTGCCCAAAAAGTATCCACTAAACCTTGTCTCAAACTTTGCCAGGATCCTTCAC ATCATGTATATTTATGATAAATACTTGTAGTCCTCATTAAGAAGAACTTTGAAAACTATATTTGAACTTTGCAGTAAAGATGGGAGAGATGTCAAGCATC CAATTAGGAGTTATTGGTGCACTGTTTCTCTCTGTGGCTTCATCTGTCTCTATAGTCATTTGCAACAAAGCTTTGATGAGCAATCTTGGCTTCCCTTTTG GTGATTATCATTTTCTCACAACTATATATATTATGCACTCTTAATCATCAAATAAAAGCCAATTTTTTAACCATTTTTTGTTCCATTTTGATAACCAGCC ACAACACTTACAAGTTGGCATTTGATGGTTACATTTTGCACCCTTCATGTGGCTCAACGCTTCAACCTGTTTGAGGCCAAGCCCGTTGATATGAAGACAG TCATGCTTTTTGGGATTCTAAATGGTGTCTCTATTGGATTTCTTAACTTGAGCCTTGGCTTCAATTCCATTGGATTCTACCAGATGACAAAACTTGCAAT CATACCATTTACAGTAATGCTTGAAACTATTTTCCTCAAGAAGCAGTTCAGCTCAAAAATAAAGTTCTCCCTCTTTCTCCTACTTGTTGGAGTTGGCATT GCCTCTATCACAGACCTTCAGCTCAATTTTCTTGGAACCATTCTTTCACTTCTAGCTATCATAACCACATGTGTTGGCCAAATTCTGACCAACACAATAC AGAAGAAGCTGAATGTCTCTTCCACACAGCTTCTCTACCAATCTTCTCCATTCCAAGCAGCAATTCTTTTTGTTTCAGGTCCTTTTGTGGATCAGATGCT CACCAAGCAAAATGTTTTTGCCTTCAAATATTCTCCTATTGTCTTGGGGTTCATTATCTTGTCTTGTTTGATAGCAGTTTCTGTGAACTTCAGCACCTTT CTAGTTATAGGCAAAACTTCTCCTGTAACTTATCAAGTACTTGGCCACCTCAAAACTTGTCTTGTTCTAGCATTTGGCTTCACATTACTTCATGACCCTT TCACTGAGAGGAACCTTATTGGAATACTTGTTGCTATTTTTGGAATGGGCTTGTATTCTTATTTCTGCACTAATGAGAACAAAAAGAAACACTCAATTGA TTTCCCATTGCCATCTCAGGTTAAGGATAAAGGTAATTCACCATTTTTGGCTGGGAAAAATATGGGCAATCAAGAAAAGGAAAGTCATGAGCCTAAGAAA TCAAGCAATGAGTCTCTTGTTTAAAACAATAATGCGAGTTAGTCTCACATACCTGTAGATGTTTCCAGCTCGGACATGATTGTCTCCGATGCGAGAGTTA TTTCAATGTTTAGGCACCTTGAGGAGTGTAAATCAAGTTTTGATCAATAAAGATTAATAGTGTATGTAATTGTAAGTCTTTATCAATCTTATTGTTATAC TCCAGGCAATATAGTTTGGTGTGAAATTGTAATATAGTTCATGTGTTAATGACAAGGGTAGAGTACAACAATTATTGGGG BLAST |
| Tissue | pods |
| Gene name | LI_gene_151248; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_383638
| Blastp | Protein PHYTOCHROME KINASE SUBSTRATE 4 from Arabidopsis with 31.63% of identity |
|---|---|
| Blastx | UDP-xylose transporter 1 from Arabidopsis with 75.08% of identity |
| Eggnog | phytochrome kinase substrate(ENOG410YSDM) |
| Kegg | Link to kegg annotations (AT5G04190) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019429252.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |