| Id Trinity | TRINITY_DN47272_c8_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_383813 |
| Sequence | GTACACGTAATATTTTTCACTTCATAAACGGCAATAAATTTGGATCCGATTGTTCCTTCGTCTTTTCATTTCAGTTTTATCATTTATTTCTCACTCATTT CCTCTCTTTTCTTCTTCCTTTGTAACACTATTTCTTTTTTTCAGGATTAAGTTGGGGAATCAATTGAATACCATGGATCGCCTTAAATCTCCAGCACGTC TCATGATTGTTTCAGATCTGGATCACACAATGGTTGATCACCATGACCCTGAGAACACTTCCCTTTTCAGGTTTAATACTCTTTGGGAAGCCCATTATCG CCATGATTCTTTGCTAGTTTTCTCAACTGGAAGATCTCCTACACTCTACAAGCAACTGAGGAAGGAGAAGCCCATGATAACTCCGGATATTACCATAATG TCGGTGGGGACTGAGATTACTTATGGTAAATCAATGGTGCCAGATGATGGATGGGTTCATGTTTTGAATCAGAAATGGAACAGGGACATAATCATTGAGG AAACAAGCAAATTTCCTGAGCTTACTCGGCAGGCAGAAACAGAACAACGGCCACATAAGGTTAGCTTTTATGTCAAGAAAGACAAGGCTAAGGATGTGAC AAGTTCTCTTTCTAAGATTTTCGAAGAGCGTGGGTTGGATGTTAAAATAATATATAGTGGAGGAATTGATTTGGATATATTGCCAAAAGGTGCTGGCAAA GGTCAAGCTCTTGCATATCTGCTCAAAAAATTTGAGGCCAATGGAAAGCCACCTGTTAATACTCTTGCCTGTGGTGACTCTGGAAATGATGCCGATCTAT TCACTGTTCCAGGAGTCTATGGTGTCATGGTAAGCAATGCCCAAGAAGAATTGTTGCAGTGGCATGCTGAAAATGCAAAGGATAATCCCAAAATTCTTCA TGCCTCAGAGCGTTGTGCATCTGGGATTATACAAGCCATAGGTCATTTTAACTTAGGCCCAAACCTGTCTCCTAGAGATATTCCAGACCATGAAAACAAT GTTATAAATCCACTTCCTGGTCATGAAATAGTGAACTTTAATTTGCTAGTTGAAAAGTGGAGGCGTGCAGAAGTTGAGAAATCTGATCTGTTTATTACTG GTTTAGAGGCACTTACTGTATGTCTTATATCCTTTTACTTTTACAGATTACCTATTATGTGTTTGTTCTATTTGTGTTCACATTCTGCTGGGTATTTGAA ATGTAGTCCGAAATGCTGCTTGTTACCAAACAATTCCTTCTTGTGTGTCAAATACTCTTATCTTTTCCCCCACATCATTTGTATATTCATGTTTTATGAA GTAGTCCTGAGGTTTACAAACAGGAAATGAAAAGAAAAATAGCATGAAGTTGGTTATTTATCATTAATATCTCTGGAAGCATGCAACTCATGCAATATGT TTTTTACGTCTTAGTTAGTAAGGCTATTGGTGCTCATACAAGATTTTGCTATTCCCCATTTCTGAGTGCATGTTGGTGGATAAATTTTTTTTTTCTTGAA CATCTTCATTCAACATTAAGATTTATCATAAGCATATATGGCTATTCTATCATTAGCTTATCAATTTTTTTGCTGAATGGCTATAGTTTTTTAAAAAATC CGCTTTCGTGTATTCTCTTGTCTTGATCTGAGGGTTACATTCTTCCTTGCAAGCACTTAATTTTGAAGTCTTTATGGAAGAGTTCACTTTTCGACAGGTA TCTAAACTGTTTATCTTTGAATGTGCAGCATCCATCTGGTGTTTTTATCCATCCTTCTGGCTCTGAGCATGATATTAAGGAGTATGTAAGTGTTTTGAGA AAGCTGTATGGTGACAGACAGGGAAAACAGTATCGGATTTTGGTGGACAACGTATTGGCAACACAGATAGGTTCAGATACATGGCTACTGACTTTTGACA AGTGGGAGTACTCTGGTATGAGTGTGCCTCGACCACTTTTATATTTTATGTTCATTTCATTTCCCTCCCCTTTCTATCTCTCAGATGAAGTAGTTGGATA TCTTGTTATTATGTTAGGACTAAAGTTATGAATAACTTACCTATTTGGAATTCGGGTGAGGGCATCTCTCAGGCAATTAGAACATTTTGCATTGCATATC TTACCTTTACTAACTACTAGTGATTTAAATTATGGTCGCTATTGTGGTCGCGGTTGCGGCCATTGCAGCAATTACGATGTAGATTGCGGCTATTGCAGTG TGAATTTATAAAAAGAATTGAATTCAATGGGCCAAAATGCAGTTTCATGTGGTTGAGCTGCGGGCTGCGGCCCGATGCAGCCACATCATTGTGGAATGGC TGAAATGCGAGCAATTGTGGCAGTCACCATAACCAATATTGTGGCCGCATAACATGATGCGGTCTGACAATTTGAGTCATTGCTAACTACTAATGTACCC ACATTACAGGTGAAGAGCGGCAAGGTTGTGTTGTTACTTCAATACTCAAAAAGGATTCGGATTGGTTCAGTTGGGTGCATGTGCACCAGACCTGGTTAGA ACAAGCAGGGAAAAATGAATGGATACTTTAGTCCTGTTCGTATGCTTATCTAAGTGCCCAACCAAGTGTTTTGTTATCCCTTCTGCAATAAATGTAATGT AATTCCAATGGCGCTATTTCTGTATCTAAATTAAGACCTTCAATGTTATGAAGGTGTGTCACATTATATATACTTCAATATTTACTGTAAGTGTCCTGGT TGCAGGGTATTATTGACAATGAAATTATAAACATTTTCTGTACTTGATTGTAGCTCACTTCAATACTCTTACGTTTGAGTTTTATCCTTCTGCTTTCTTC TTCTTCTCTTTTCTTTTCTTTTTTGGTACATGACACATTAACTATTTAAGTATTACATATTCCAGAAAGTTCAAAATACTAGACATGTGTCACCGTAAAA ATGGAAAAACTAGATATGCTAACTTTATCTCTGTAGAAACTTAAACACATTCACTGAGATCCAAGCAAAGCTCTCTGTTTGTGCTTAGTGTGCTTGTCAA CACCAGAAGCTTTTGTTGCAGCAGCATGAATTATAGAAAAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_151302; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_383813
| Blastp | Sucrose-phosphatase 1 from Nicotiana with 74.07% of identity |
|---|---|
| Blastx | Sucrose-phosphatase 1 from Nicotiana with 74.07% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (107767908) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019428612.1) |
| Pfam | Sucrose-6F-phosphate phosphohydrolase (PF05116.12) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |