| Id Trinity | TRINITY_DN47276_c3_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_383574 |
| Sequence | CCCTTGCTGGGTTGAAAGCAAAAACAAATGGAAAATTGTTAGAACTCTTTTATCCATTCCTTCACACTCAACAGCTTAGCTTTTACTCTTTATGCCATGG CGTCTTCATTCTCAACACAGTTGCTTCACTCTCAGAACCCACTTTCTCATCTCCAGGGTAATAATAGCAAAGTTAGATCTCATATGGTATGTTGCAGTAC CAGATTATCGCAGTTCGGTTATGGTAAGGGATTGACATCAAGATCACATAATGCATTGAGGTTTCCTGCTACACAACATTCTGTAGCGAAGTCAACCAAG TATAGGAGAATGACATGTGTCAATGCTACAGACAGTGTTGTAGAGCTACAAGCTAAAGTGACAACCAAGTGTTTCTTTGATGTAGAAGTTGGGGGTGAAC TTGTGGGCAGGGTTGTCTTGGGCCTGTTTGGCGAGGTCGTTCCTAAGACGGTTGAGAATTTCCGTGCATTGTGCACAGGAGAGAAAGGATACGGTTACAA AGGAAGCTCCTTCCATCGTATTATCAAAGATTTCATGATTCAGGGAGGGGACTTTACTGAAGGAGATGGGACTGGTGGCACAAGTATCTATGGTGCTCGT TTTAAAGACGAGAGTTTTGCCTTGAAGCACATTGGTTTTGGAGTTTTGAGCATGGCTAATGCCGGTCCTAATACCAATGGCAGTCAATTTTTCATTTGCA CTGTAAAGGTGAGAGACATCACACATGTACTAACATCTTGATTTTTACAAGCTACTCCCATATAACTTCAATGAAAGTAAAACGACCGAAAGTCGATATC CACAGACTCGTAATGCCTCATTATCGAAGGTTATATTCGTTAAGTCTGTTTTCAGATCTAAGTATGTTATATATTATACCTATTCGATATCGATTTGTTT TGCTAATAGACTCGGACACATTGCTGCAATTTCTTTTCTCATATTTAGTGCTCAATTATTCAATTAAAGTATCCTAATCTTTTATGATATAGACTCCATG GCTAGACAATCGGCATGTTGTGTTTGGACATGTCATCGATGGAATGGATGTTGTGAAGACGCTCGAATTCCAGGAGACAAGCAGGTTAGATATCCCTCGG AAGCCTTGCAGAATTGTCAATTGCGGAGAGCTGACTAACGAAGATTGATCTGGACCTCGCCGAGTGAGATTCTCGTACATTAGGCCACCCTTTTTTTGTT AGTACAATGTTCAGTCTTCTACTTGTCCCTTATTAATCATGTTAATGCATTTGTGTTATCTTTGTCAAATTTTGTATTACTAGCCTTGTGCCAAATCCTT ATAAAATAGAGTCTTGTATTTTCTTCCTATAAATTTCTGTTTTTGATATTTGCATTTTAACCTATACATTTTCATGATCCCAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_151338; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_383574
| Blastp | Peptidyl-prolyl cis-trans isomerase CYP20-3, chloroplastic from Arabidopsis with 59.56% of identity |
|---|---|
| Blastx | Peptidyl-prolyl cis-trans isomerase, chloroplastic from Vicia with 61.86% of identity |
| Eggnog | PPIases accelerate the folding of proteins (By similarity)(ENOG410Z0G4) |
| Kegg | Link to kegg annotations (AT3G62030) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019440650.1) |
| Pfam | Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD (PF00160.20) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |