Ll_transcript_383587

• Id Trinity: TRINITY_DN47276_c3_g1_i5
• Name Transcript: Ll_transcript_383587
• Sequence: CCCTTGCTGGGTTGAAAGCAAAAACAAATGGAAAATTGTTAGAACTCTTTTATCCATTCCTTCACACTCAACAGCTTAGCTTTTACTCTTTATGCCATGG CGTCTTCATTCTCAACACAGTTGCTTCACTCTCAGAACCCACTTTCTCATCTCCAGGGTAATAATAGCAAAGTTAGATCTCATATGGTATGTTGCAGTAC CAGATTATCGCAGTTCGGTTATGGTAAGGGATTGACATCAAGATCACATAATGCATTGAGGTTTCCTGCTACACAACATTCTGTAGCGAAGTCAACCAAG TATAGGAGAATGACATGTGTCAATGCTACAGACAGTGTAAGTGTACCGGTACCTTTTAAAATTTGCGGTTTTTGAATTTGTTTACAGAAAATTCATTAGC CAATTCGAGATGGTGAAAGAGTTGAAGGATAGCACATTCATGAATCAGGATCACTAAACTTTGTGCCTTACATGGGTGAACACTTAGTATCGACTATCGA ACTTAATCCTACAAATAAATGGTTCCAGAAATTTGGGTTGCTTATTAATTTTAGAATCATTTGATATTTAATATTTGGATTGTTGAATGTTACATCTCCA TGCTTGTAATGGTTTTCATTGTTTTAACCAGAAAAAAGTTATTCTCGGCAATGCTCAAGAACAAATTTTCCTGTGATTATGATGTTAGATTATTATCTTA CATGTTTTCGGTACCTTTAGGTTGTAGAGCTACAAGCTAAAGTGACAACCAAGTGTTTCTTTGATGTAGAAGTTGGGGGTGAACTTGTGGGCAGGGTTGT CTTGGGCCTGTTTGGCGAGGTCGTTCCTAAGACGGTTGAGAATTTCCGTGCATTGTGCACAGGAGAGAAAGGATACGGTTACAAAGGAAGCTCCTTCCAT CGTATTATCAAAGATTTCATGATTCAGGGAGGGGACTTTACTGAAGGAGATGGGACTGGTGGCACAAGTATCTATGGTGCTCGTTTTAAAGACGAGAGTT TTGCCTTGAAGCACATTGGTTTTGGAGTTTTGAGCATGGCTAATGCCGGTCCTAATACCAATGGCAGTCAATTTTTCATTTGCACTGTAAAGACTCCATG GCTAGACAATCGGCATGTTGTGTTTGGACATGTCATCGATGGAATGGATGTTGTGAAGACGCTCGAATTCCAGGAGACAAGCAGGTTAGATATCCCTCGG AAGCCTTGCAGAATTGTCAATTGCGGAGAGCTGACTAACGAAGATTGATCTGGACCTCGCCGAGTGAGATTCTCGTACATTAGGCCACCCTTTTTTTGTT AGTACAATGTTCAGTCTTCTACTTGTCCCTTATTAATCATGTTAATGCATTTGTGTTATCTTTGTCAAATTTTGTATTACTAGCCTTGTGCCAAATCCTT ATAAAATAGAGTCTTGTATTTTCTTCCTATAAATTTCTGTTTTTGATATTTGCATTTTAACCTATACATTTTCATGATCCCAAAA
• Tissue: pods
• Gene name: LI_gene_151338;
• Additional information: details;

Expression of Ll_transcript_383587

FPKM

• PAB: 0.1
• PNAB: 0.2
• PS1: 0.3
• PS2: 0.4
• PS3: 0.1
• PW1: 0
• PW2: 0.7
• PW3: 0.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_383587

• Blastp: Peptidyl-prolyl cis-trans isomerase, chloroplastic from Vicia with 80.19% of identity
• Blastx: Peptidyl-prolyl cis-trans isomerase CYP20-3, chloroplastic from Arabidopsis with 78.95% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019440650.1)
• Pfam: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD (PF00160.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;