| Id Trinity | TRINITY_DN47276_c3_g2_i1 |
|---|---|
| Name Transcript | Ll_transcript_383572 |
| Sequence | GGAGTTCTGTGCCATGGTTCACAAAATATATATCTACCCGAAGGAGGAGATTCAGAAAATGAGCCCTGGGACCCTGAGTTCAAAAAATGAAGATAATCAT TCAGCTAGCGTATGTGCAGAAGCAAAAGAAGTTAAAGATCAGCTGAATCCGAAGTTAAATTCAGAAAGTGGCTCAATGCCTGCTAACTACTAGATTCTCC TAGCTTCCAGAGTTTATGTTCGAAAGTCGGGGTTTACTGTCGTGAAGCTATCCAGATGTAGAATATGACCATAAGATTAAGTGTAATTTTGAGTTTGACA CTTCTACTGTTTTGAATCAGAGATTTTGGACGTAGCCTGGAATTATTGTTAGTATATGCTTGCATAGTTAATAGTGAATACTATAGAGTCCTAGTATGTA GCGGAGTTACATTGCCTAGTAGTAGTTGTACAAAGTTGTTTCCCTTGAACACATTAACGTATAGAAGTGTAGTGTTATGGTTGGGATAATCCCTTTTTCA TTTTTAATATATATCTCATTCTAAATCATAATTTGAGGTAAAAAATAGTGTGGATATCTATTTCCAACATAAGTGTTGAAATGTTTGAAGGATGTTATGT TGTTTAGTGAAATGTATGTGGTCGGTCAATCCTTGGAATGGAACTAGTAGTGGTGTGGTCCTCGTGTTCTTTGATAACTGTGGTTCAATTACGTGATGAA GGTTCCTTGGAAGCTCCACTTTTTATGGTCAATGGTCTTTTTTAATATAATATTGCAGTCAACAATGGCACACAAATGGGTCACATTATTTTAGTGGTAC ACCTTTTCTAGCCTTAAGCTCATTGAATTCATAGTTTTTGATTTTATATCAATGTCGCTTTACTCTGGATCGTGGTTGGCTAAACCTTTATATTTGCTAA TTTTAAGGATTATTATTAAGATTGTAATATTTTTGTACTGATAGTGTAAAGATTTATGTATATTCACTATATTTTTTACTATGTTTTTTGAAGAATCAAT AATAATTAAATATGAATTATGGACGATATAATAATATTTTATAAAACTTATATATTATTAGTGCATATATCTTTTTCTGATAATGCTTTGTAAACATAAT TGTGCAGTTTGTGATGGTGATATTGAAGTCATCAGTGCCAATATCATTTGAGGGTAACAAAGAACCAGCAGCATATGGTGAGATAGTTTCAATGGGTGGC ATTAACAAAGAAGTTAAGAGAAATCTCATTTCTACAATTGGCAAAATATTGCACTCTAACCTATCCATCCCAAGAACTCGATTTTTCCTCAAAGTCTTTG ATACAACTGCATTTAGCACTAACTCCAAAATCTAATGATTAACCGTATGGAAAATGATATATCATTCTACTGAACTTTCCTACAAATCTTCCTACCTACC AGCAAATGACATATGTTACAAATTAATATTTTATTTATTAACGATTGATTTATAAATGATATACGTCATTTTATTATAGGTAGAAAATTAGTATGAAAAT TTCGTAGAATTATATAGCATTACTCTTATCAAATTGTCAGAGCTTAAGATTGTGCTTAAATCTCTAATCATCAATTATTTGTGTTTTAATTTCATCAATT ATGCATGCCCTACTTGTACTTTATTTTAATTTGAACCCAAAATAATATGTTTTACTTTCATTTGATTATTTACGGAAAGTCAGGTTCACCAAGTATTCTA TGTTTTATGTTTTTTTTGTCTCTCTCTTATTTCATGCATTACTTTCAACATGACAATAACGTACCATTGCTGATAAAATTAATAAGTAGTAGTTTTCTGT AAGGAAAATAATTTAGAGCTTGAATAGTG BLAST |
| Tissue | pods |
| Gene name | LI_gene_151339; |
| Additional information | - |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_383572
| Blastp | - |
|---|---|
| Blastx | Auxin response factor 2A from Lycopersicon with 59.65% of identity |
| Eggnog | auxin response factor(ENOG4110RNJ) |
| Kegg | Link to kegg annotations (778240) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019412944.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |