Id Trinity | TRINITY_DN47276_c3_g2_i2 |
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Name Transcript | Ll_transcript_383580 |
Sequence | CTGGTGTCCAAGCCAGCAAAGGCATCACAATGAAAGTTTACCATGTAACTTTCTACTCCCTTATATATCTATCTGTCTATATATAGATACAAGGTGAGAT TGTTCTATAAATAGAAACTATCGAAGTTCACTATACAAAACCAACTTGAGTTCCAAAACTGAGCATAGAATCACAAAAGAGGAAGAGAAAAAAATGCCTT GCCTTTACATCACCACCAATCTTAACTTAGATGGAGTTAACACTGATCTAGTCTTTTCTGAAGCCACCACTGCTGTCTCCAAAATCATTGGAAAACCTGA AAAGTTTGTGATGGTGATATTGAAGTCATCAGTGCCAATATCATTTGAGGGTAACAAAGAACCAGCAGCATATGGTGAGATAGTTTCAATGGGTGGCATT AACAAAGAAGTTAAGAGAAATCTCATTTCTACAATTGGCAAAATATTGCACTCTAACCTATCCATCCCAAGAACTCGATTTTTCCTCAAAGTCTTTGATA CAACTGCATTTAGCACTAACTCCAAAATCTAATGATTAACCGTATGGAAAATGATATATCATTCTACTGAACTTTCCTACAAATCTTCCTACCTACCAGC AAATGACATATGTTACAAATTAATATTTTATTTATTAACGATTGATTTATAAATGATATACGTCATTTTATTATAGGTAGAAAATTAGTATGAAAATTTC GTAGAATTATATAGCATTACTCTTATCAAATTGTCAGAGCTTAAGATTGTGCTTAAATCTCTAATCATCAATTATTTGTGTTTTAATTTCATCAATTATG CATGCCCTACTTGTACTTTATTTTAATTTGAACCCAAAATAATATGTTTTACTTTCATTTGATTATTTACGGAAAGTCAGGTTCACCAAGTATTCTATGT TTTATGTTTTTTTTGTCTCTCTCTTATTTCATGCATTACTTTCAACATGACAATAACGTACCATTGCTGATAAAATTAATAAGTAGTAGTTTTCTGTAAG GAAAATAATTTAGAGCTTGAATAGTG BLAST |
Tissue | pods |
Gene name | LI_gene_151339; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_383580
Blastp | Macrophage migration inhibitory factor homolog from Trichuris with 29.41% of identity |
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Blastx | Macrophage migration inhibitory factor homolog from Trichuris with 29.41% of identity |
Eggnog | - |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019412944.1) |
Pfam | Macrophage migration inhibitory factor (MIF) (PF01187.17) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |