Id Trinity | TRINITY_DN47278_c1_g4_i2 |
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Name Transcript | Ll_transcript_385704 |
Sequence | TTGAAAAATGAAATAAATGATAAAATATAACTTGTGAACAATTACTTGAGGAATGCTGACAGAAAGTGGTTGTCCAAACAAAAATTGTTGTCCTGGATCA GAAAACCTGAGAGGGCTGAGTGGAATATGAGGTGCTACAGGAGCAGGAGGAGACATCGGAAGAAGACTCATTTGTGAAAATTGTGCCTGTATGAAATCAG TCATTTGTGCTAGGGCAACAAAAAGTTTTCTGCCAGCAACCACTTCACCATTCATCACATGAAGCTACAAATACCAGCAGATTATGCATCTCAGCAATGA AATACTTGGACAATTATAGAAAAACAGTCAACAGTGTTCGTTTTTATACTCAGTTACTTACAGCTTGATTTGCTTCCTCAGGAGTTGAAAATTCAACAAA TCCATATCCCGAAGAAAAATATTCTGGATCGTGTATAACCTGCAGGCCAGACAAAAAAGAAAGACATTTCAAGAAGATGAAGGTTTGGGCATTCTGTATA CAAGAACAAAAGGAAGAACCATATTCACACACCTGGTATGAAACTACTCTGCCAAACACTGAAAACAATTCCCTAAGATCTTCACCCGTAATACATTCAT GCAAGTTGTTAATATACAAGTTAACATATTGAAGTTTCTCTGCAGCTTCCTTCATAATTTGTTCAAAGGCTTTCTTCAGTTCAAGCTCTCTTTCAGATTT CTTTAAAGATCTTCTGACATACAAACTCCTACCATCAAAATTCATTCCATTAAGTGCCTCTAGAGCTTTAGCTGCACTATCTGGGTTTTCAAAATTTACA AAACCAAATTGCTTTGAACTACCATCTATTTCTCTCATCACTATAGCATTAGTAATGGTGCCAAATTCGCCGAAAAAATTCTTCAAGTCAATCTCTGTCA GCCACTCCGGTAGGTTTTTTACATACAAACTAGTAAATTTTGAGGTATCACCACTCAATACACTGTGTCTATTTCTAACCTCCTTTGGCCGGAAATGACT TACATAGATCTGTTTATCATTAACCAGCTTCCCATTTAAGTTGTCAATTGCATTTTGTGCAGATTCTTCATTGTCAAATTGTGCATAACCATAGCCTTTA GACTGGCCTGTAGCATCTTTTGTAATCTTGCAAGAAATAAT BLAST |
Tissue | pods |
Gene name | LI_gene_151349; |
Additional information | - |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_385704
Blastp | Polyadenylate-binding protein 2 from Arabidopsis with 48.47% of identity |
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Blastx | Polyadenylate-binding protein 2 from Arabidopsis with 48.47% of identity |
Eggnog | poly(A) binding protein, cytoplasmic(ENOG410XR5X) |
Kegg | Link to kegg annotations (AT4G34110) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019414651.1) |
Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF00076.21) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |