| Id Trinity | TRINITY_DN47287_c2_g2_i2 |
|---|---|
| Name Transcript | Ll_transcript_384854 |
| Sequence | CAAAAACACACACTAGTGACCAATGAGGATAACACCCTTGTATAGTAGAAAATATTGAATGCTTCTAACTAGTAGTCCTAATACATTTAATTTGATAATT TTGAACAAATTCATATAGTTTCCATTCACTAATAATAGTTTCCATTCAATCTCAACTGAAAAAAAAAACAATCTTCTTGTACAAGGAATCTTAATTAATC AAGTGCTTTTAAGTGGAGTTAAAAGATTTCACACGGTCCATGATTATAATGGTACCTCGTACTTTAGTGGGAGCAAATAAGTGAATTTATGAGAAGATCT GTTTATAAATTGGAAGCAGCATGAAATGATGTGAATCAAACAAACAATATTGGCTTTTGTTGTGAGAGGATAATTAAGGAAATGGCAGGTGGATCTTTCA CAACAGGTGTTGTGGCTAAGGAGAGGGCAAAGCAATACAAGGGAAGGGTCACTGCTTATGTTATCATTGCATGTATTGTTGCTGCCACTGGTGGCTCTCT CTTTGGCTATGATGTTGGGATTTCAGGTTCAACTATTATCCATATTCTGACTCACAACTTTCATTATTTATACTTTTCATCTTCAGGTTCTTTTTCTACA ATCCATTATGTGAATCAAAACTTAGATACTGTTTTTATCACCTGATCTATTAAAACTCACTGTCATTGGAAGTTCAGACAACAAATGAAACTACAGCTGT AAGCAAAAAGAAGAGAACTGAAGTACACATAACTTCTCAAGATTGCAGAACTTTTCAATCTTTCCTATCTGCACTCTTCACTTGGTTTCTAAGCTGAAGT GTTTAATTAAGACCCAATTTCTCTCATTCTAAAAGATGCAATTCCCATTTATTATCTGGCTAATATAATTAAAGCCGGGTCCTTGAAATGTAACCTTCAT AAAATATCAAGTGGCTAGCTGGAATGGTAAATTTGTACGCCCGCATATTGAATTGCATTTCAACAGTTACTTAGACTCTATTGTTCCAAATCCAAACCAT CCCACAATTAGTGATAAAAATGTATTGTTATCACCCAAATCTTGTGCTCAAACTGAGATAGATAATGTTTTGGGGAGAAAACATGAATCATGAACAACTC TAACTAATCTATTTTAGTGACTCAGCACTTTTGTAGAAGGGTCATAACAAATTACATTCTTTAATCCAGAGTCTAGGCTAGACTACTCATATCTCTTTTA TTTTTAGCTGATCTAGTAACAACTGTTATCATTTCCCTTATCAATATTGAAGTATAAGCTTGCTCATGTATCAGAATATTTTTGTGATGTATGCAGGTAC AGATCTAATGGGGGCGAGCACTGCACATACTTTGTATATTTAGTTATATATGTATATATTCAATAAAAAAAATTATTTCCCAACAGATATATTTTTATAT ATTTGACCACTTCTTACATGTCCAGTCCCTCTCTCCAGGAAGGACTGGCCATACATAAAGCTTCCAAAGCAGCCACTTTAGTCCTCAATTTTCTTCTTCG AGTTTTTTAGACCTTATCTTAAGTTTTAAGGTTGTACTGTCAAACTAAATATTGTGAAAAGAAAGTAAGTATGAGTTTTTATTAAAAAATATTTGAAATG GTTACCTGTTAACAGGAGGGGTTACTTCAATGGATGGTTTTCTTCAGGATTTTTTCCCTTCGGTGTACGAACATAGAAAGCACACACATCAAAATCACTA CTGCAACTACGATAATCATGGGCTTGCAGCATTTACCTCTTCTCTGTACATTGCTGGTTTAGTTGCTTCTCTGTTGGCATCTGTAGTTACAAGGAAGTAT GGACGTCGTACTAGTAGCATAAGTGGTGGTATCAGCTTTCTTATTGGCTCAGCTCTCAATGCCTCTGCTCTTAATCTCGAAATGCTTATCATAGGTCGAA TTATGCTTGGTGTTGGCATTGGATTTGGGAATCAGGCTGTTCCGCTTTATTTGTCAGCGATGGCACCAACCCACCTTCGAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_151411; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_384854
| Blastp | Sugar carrier protein A from Ricinus with 74.36% of identity |
|---|---|
| Blastx | Sugar transport protein 7 from Arabidopsis with 71.77% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (8262851) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_003546610.1) |
| Pfam | Sugar (and other) transporter (PF00083.23) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |