| Id Trinity | TRINITY_DN47296_c3_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_384736 |
| Sequence | TGAATATAAAAAAATGGTGTTGGGTTTCTTGTTCGCTTCTCTGAATTGAATCATTGTTTTCCATTCCTTTGTTGATGAAGTGTTATAGCTATAGACAAAT CAATCATAAATCATAATATATTATTACTCTTCAATCTCATTCATCTCTAATTATTAAGAGGAAGTGTTCAATGGCCTTGGTCATTGTTGTAGAGTAAATG GAAGGGACATTGCTTGCACGAATTTCCCTAGTATATCAGATATTTGAGGGGGATTAACTTTAAATTACTCTCAATGGTAAATCCAAAACTATCTACTCGC CCGAAAATATGTTACAGGCCTATTCGACCTTCTGACTTTGAAATTTTAGAACATATTCATGTCAAACTATTTCCCATCAGGTATGAATCGACTTTTTTCC AAGATGTGGTTAATGGCCGCGATATCGTGTCATGGGGAGCTGTGGACTCTAGTCGGCCCGATGGCCAAAGCGATGAACTCATTGGATTTGTGACAGCAAG GATTGTTCTTGCAAAAGAAAGCGAGGTTGGTCACCTTTTCGCCTTTTCTTTTATTACGTCAATGTAATTTTATGGAAAGTTATTCTTACAACATTGCTAG AAGTTGAGATGGAAAGAGAAACTGTGATTTGTGGCTCAGTCTTTCACTACTCTATGGTAAGGCGTCTGTCGTATGAAAAGGGCTTGGATGATTTAGTTGG TGGCTTTGAAGGAAAGATGCTATGTAGCAAAGTGTTGTTTGAAAACTTATCCAATATGCGTTAAATCAACTTGCTTAAAAGGAAGATAACAAGTTCATAT CATGCCATTGCTTATACACTGAGACAAACTTGATGAAAATGTTGTCTTTAATATCCACAATCTCACTCAACAATCATTTTGATCCCTGTATAATCAAGAC AAACTTGAAACTTCATGTGATACTAAATTCAGTCTGATTAAGTGGCTCTCATATTTTATTAGTCTGCCTGGCACCAACTTTTGGACGATGGCTTACTAAA ATTAAGTTCGCAAGAAATATGTACAAACTGTCCATAGGATATTAGCCTCCAAGTGTTATGTGTGATATAAAACTTAAGACTATAAGACCATTGATGCTGT ATGGGACTGAATTTTGGGCTACAAAAAGCCAACAAGAGAATAAACTTGATGTAATAGAGATGAGAATGTTGTGTTGTTTGAGTGAACAATATAGACAACA TGATATTAAGAATTAAATAATTAATGCTCTGGAGAGAATGTTAAGGTAGCACTTACTGTAGAAAAGATGGTATAATCTTGCCTTATGTCGTTTGGACACA TGTGAAGAAGAACTGTGGAAGTCTAGGAGAGAGCATCAACTAAAGGGTAGCCCAAGCTAGAGGTTGAGGAAGACCTAGATAAATTATAAGTGAAACCATT AATAAGGATTTGGATATATTATAAATGATATCTCTATAGATCTGATTTATGATAAGACATTATGATGTTGTTTGTTCCATGTAGCTAACCTCACTTAGTG CAAAAAGGCTTGGTTGTTATTATTACCCCTTCTTAAAGTACAATTATTTGAATGCTTATATTTTTGCTGATATTTGTGAATATTATTCTGGTAGATAGTG GATATGCTTGGATATGACTCATCCAAATCAGATCAAACTTTAGTTTACATTCTGACTCTGGGAGTAGTGGATTCATATAGAAATCATGGTATAGCTTCTT CTCTGATTAGGCAGGTCATAAAATATGCTTCAAGTATTCCTACCTGTCGAGCTGTTTACTTGCATGTAATTTCTTACAACAACCCAGCAATCTATTTGTA CAAGAAAATGTCTTTCAAGTGCATAAGAAGGTTGCAGGGGTTTTACTTAATCAATGACCAACAATATGATTCGTACTTATTCCTGTACTATGTCAATGGG GGGCGATCTCCTTGTTCACCATTAGAGCTTTTGGCTGCAATGGTAAGCTACATGAGGAGTGGCTTTAAGTTGGTGGCTGCAAAGCTGTGCAAGAGTGAAG AGAGGAAGGTGTCAAGGTGGTCAAAGTGTAAAGAAAGCCATTCTCTTGTATCTGTGACACATAACAAGAGAAACCTAGCAGTTGAGTGTACTGGTTATGA GTGTGTTTAACTTTAGTTTTATAATTTCTTCCATGTTTCCCGTTTCCTGTATAATTCAACCCCATATTGAAACCAAAAAATAATACTTGATGTAACTACC ATGTCCTAATAAACTCACATTTCATGTTAGAAGGTGATACTGTTTGTGCAATGTGAATCTGTTGATCTTGTAACAATTTATGGGGTAGCTCATATCTTAA TTAATATTATGAAATGGAAATTAATTGCAATGGGACCG BLAST |
| Tissue | pods |
| Gene name | LI_gene_151493; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_384736
| Blastp | Histone acetyltransferase MCC1 from Arabidopsis with 57.24% of identity |
|---|---|
| Blastx | Histone acetyltransferase MCC1 from Arabidopsis with 57.43% of identity |
| Eggnog | N(alpha)-acetyltransferase 60, NatF catalytic subunit(ENOG410Y94A) |
| Kegg | Link to kegg annotations (AT3G02980) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019454346.1) |
| Pfam | Acetyltransferase (GNAT) family (PF00583.24) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |