Ll_transcript_385117

• Id Trinity: TRINITY_DN47299_c0_g2_i12
• Name Transcript: Ll_transcript_385117
• Sequence: CTTTAACCAAGCTGCGTCTGCAAGTAGATAAACAAACTACTTATTATGCTCATTGCTCCACCGATCATTTCAGGGAGTAGTAGTAATAATAATAATAATG ACGAATGGTGTTATCTTCACTCTCACAATTACTCTCTGAGTTTAAATTCACAATTTGTTTTCACTCTCTCTTCTATCCCTCTTGAGCTTGTGGTCTTGGT GTGAAAAACTAAACCCTACCTACACTCTCATCTTTTAAACTTCATCTTCTCCATTGCATTGCACCAGATCTGTAACCGTTAACCAACAACTCAAACCTAT GCATCATTAGTTTCTTCTCAACCATGTCCAATTCTGATCCCAAGCCAATGCATCCTTCTTCGTGGGCCAAGAAGACCGGTTTCAAGCCCAAATTCTCCGG TGAGACCAATGCCTCCGATTCCGGTCAGATAGCGCTTCCAACCAACACTACTCAACCTGACACTAACCTTGATCTCGAATCGGGTCGGGTTCGGAGTCAG ACACTACCTGATGCAAACGGTAACGGTAATGGTGTCGGAGCTGCTCAGGGAGAGAAGGTTCTGGTGAAGAAGCGTAGGGAGTCCGATGGCGCGCCGAAGA ATTCTGTTCCGAGTACCAATGGCCAGGCCAATGCTCCTCCTCCGGTGGACCAGCCGCTGCGGAGAGCTGCGAGGCATGAGGAAGTGGTGGATGATGATGA GTTTGTGCATAGGCAGTCGCATATGAAGTATGAGCTCAGAGATTCACCTGGTCTTGTTCCAATTGGTGTGTACGGTATCCAGCATTATTTTTCAATATTA GGTTCGTTGATTCTCATTCCGCTTGTCATAGTTCCTGCCATGGGAGGCACTCATGAGGAAACCTCTAAGGTGGTATCGACCGTGCTCTTTGTGTCTGGGG TAACTACTCTATTGCATATCACTTTCGGGTCCAGGTTGCCCTTGATACAAGGCCCTTCTTTTGTTTACCTGGCTCCTGCTTTGGCGATAATCAACTCCCC GGAGTTTCGAGGATTAAATGAAAATAAATTCAAGCTTATAATGAGGGAGCTGCAGGGGGCTATAATTATTGGTTCATCTTTTCAAGCTTTACTTGGATAT AGTGGTCTCATGTCGCTGTTTGTAAGGTTGATCAATCCTGTAGTTATATCCCCTACTATTGCTGCGGTTGGACTTTCATTTTACAGCTATGGTTTTCCAA TAGTCGGCACATGTCTTGAGATTGGTGCAATACAGATATTAGTGGTTATTGTTTGTTCTCTCTATTTTCGTAAGATATCTGTTCTTGGACATCGTATATT TCTTATATATGCGGTTCCTTTGGGTCTGGCAATTACGTGGGCATTTGCTTTCATGATGACTGAAGCAGGAGTCTACAGCTACAAAGGATGTGACATAAAT GCACCTGCCTCAAATATGGTTTCAGAACACTGCAGAAAACATTATTCAAGGATGAAGCATTGTCGGGTTGATACTTCTCAGGCATTGAAATCCTCCCCAT GGTTCAGATTTCCTTATCTGCTCCAATGGGGTACTCCTATCTTTCACTGGAAAATGGCTCTTGTAATGTGTGTGGTTTCCCTAATCTCATCCGTGGATTC GGTTAGCTTCTTTTCTTTTCCTGTTTTGATTCCTGGACTGTATTTATTAATCTTGACTGAAAATATGTTGATGATTTAACTTGTTTTAACCATCTATTGG CCCCTATTACCATCTTTATAATGTACTAGCAATCTTGTTTGTCTATGGCTATTCATTTATTACATATGATACATGCCTTGATGGAAATTATGATTTGGAC CTATCGAAGTGATATATATTTCATAAAAATGATGATTTGGGTGCTGAGAAAACTTGCATTTAGTATTCACTTAAAGATCATTTGTCACTTCAGTTTAACT GCAAGCTTTCTCCATGAATGGAGAAAACTTGAGAATGAAGAGCCTGGAGGCTTTCATATAGTTTATCAGATCCAAACTTGAAAACAATGGTTGCCATCTT TTCATGTTGTTTTTTACATGATCAAGTTCTTTTTTCTTCTTCTGTGTTCGTTTTAAGTCTAGGTGGGGTTATTGGCACTCTAAATTGCCTATTCACACTC TTCATTAACCAACCACATTTTTAGTTTTTTAATTTACAAATTTGTGACTGGTTAATAACAAGTGTGAATAAGTATTTGGGAGTGCCAATAGCCCCATCCT TTAAGTAGATACCATGTATAAGGCACACTAATGTAGTATTGGTTTGGTTTTATCTCATCTTAGAAAATGACTGGATCAATACAATTATTTTATAATTACA TTTTTTAATCTTAGTGCTGCTAATAGCAACTATTTGATTTCCATAGAATAGTATGTACTGATCTATTAGAGATTAACAATATACTATCTCAAAATTGAAA TGATATTTTCCTTGTATTTTCCTCTGCATCACTGGACCATGCTGTGGATAAGGGATACTCGTGTGCACTTTTAACTTTGTAGGTCGGCTCATACCATGCA TCTTCATTATTAGTAGCATCCAGACCTCCAACTCCTGGAGTTCTTAGCCGAGGAGTTGGTTTGGAAGGTCTTTCTAGTGTCTTAGCTGGTATCTGGGGAA CTGGAACTGGATGCACAACTTTGACTGAAAATGTCCACACAATTGCTGTGACAAAAATGGGAAGCCGCAAAGCTGTTCAACTGGGTGCATGCTTTCTAAT TGCGCTGTCTCTCGTGGGTAAGGTTGGAGGGTTCATTGCTTCAATTCCTGATGTCATGGTTGCTGGTCTTCTCTGCTTTATGTGGGCAATGCTCACCGCA TTGGGCTTGTCAAATCTACGCTATAGTGAGGCTGGAAGCTCTCGCAACATCATCATTGTTGGGTTATCATTGTTTCTCTCTCTCTCTATACCCGCCTACT TTCAACAATACGGTGTTTCTCCGAATTCGAACTTGTCAGTACCAAGTTATTTTCAGCCCTACATTGTGGCCTCTCATGGGCCTATGCACAGCAAATATGG AGGGTTGAACTATGTAGTGAATACAATTTTTTCACTAAACATGGTGATAGCTTTTCTTGTGGCTATTGTGTTGGATAATACTGTCCCTGGCAGTAAGCAG GAACGTGGAGTATATGTTTGGTCTGAACCTGAGGTTGCTAGAATGGAGCCTGCTGTTGCTAAAGATTATGAGTTGCCGTTGAGAGTGGGTCGGATTTTCA GATGGGTGAAATGGGTTGGCATGTGAAAGGACGGTTTCATATATATTGTTGAGCTCAATGATGAATTGTAGTAGGTCATATTACAAAGTAAATTTTGGGT ACAATGAAGATCCAGAGGGGTCTATTTGTTTTGTAAATTAGGTTAACCATGTATGTAGTTTTGATTCATTCAAAATCACCAGGTGGAGTTTTTTCTTCTT TGCTTTACTGCGGACTTTGACAAATCATCCTGGTTATGTATATATACATTATTATATTTGAAGTTTTTTCTTTTGCAGATTTATCCATCTTCATCAGTAG AGTCATTGGACCCTGCTACTCCTTTATCTAACTGTCCAGTTTGATTTTTTGGGTAGTTCAGGGATCAAATAAGAGGGATGGTTCAATTTTTGTTTTTGAC
• Tissue: pods
• Gene name: LI_gene_151505;
• Additional information: details;

Expression of Ll_transcript_385117

FPKM

• PAB: 0.6
• PNAB: 5.9
• PS1: 5.7
• PS2: 3.6
• PS3: 4.8
• PW1: 4.1
• PW2: 3.9
• PW3: 2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_385117

• Blastp: Nucleobase-ascorbate transporter 12 from Arabidopsis with 65.62% of identity
• Blastx: Nucleobase-ascorbate transporter 12 from Arabidopsis with 64.52% of identity
• Eggnog: permease(COG2233)
• Kegg: Link to kegg annotations (AT2G27810)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019448812.1)
• Pfam: Permease family (PF00860.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;