| Id Trinity | TRINITY_DN47303_c1_g2_i15 |
|---|---|
| Name Transcript | Ll_transcript_499874 |
| Sequence | TATGCAGAGTACTACACTAAACACTACACACGTTTCTGTAACGGTCACTTCGTGGTTGTGTTCTTACAATAAATAAATAAAAAAAGGACTTTGATCATTG ACTACACTTAGATTCTTCTTTCTTCTCAGATGGATTACAACAACACTCAAAACATTGGTGCCACAGATCCATGGGATTTGCTTAAGATGGATTATTGTGT CCAAAAGACTTCCAATTTTGAAATTCCGGAAGAATTGTGGAACGACGGGCTTCAAACTGAAGAAGACATTTCGTACATGTTCGAGAATGTAACAACTCCA GTTAAGGCTTGTGGTGATTTGGCATACACTATCAGTAACGGTGATAATATGCAGAAGGAACTAGAGGAATATAGAGAGACTTCTCAAGTCAAGAGGCGGC GGATGTTACAGTTCAATAGCCAAGATAGCGACCATTCTTTTTCAAGTGAAGAGGCTACTTCAGCATATTTAAAATTAAATGTCAGTGTATGTAGTTTTTC GCACTCATAGCATGTTACTTGGTTCTAACAACATGAAAAAACTCGAGAATTGCAGATTTGTTCGTATTTGTGCAAATATGTGAATTTCATTTTAAGTAAA TTTCTTGCTGGTGTTACCATTATGTTGTTGATTGGAAAAGAAATGCACAATGTCTTCATTACCATGACTTAATGTCACTTATCCCCGTTGTTTCCGTTGA TTTTATCCTTTCCTTCATGAAAAATGACCAACGTTTTTGTCTGTATTACTGCCTTGTGCCGACTTAGCTGTTAAGTGGGGCTTATTCACTATTCCACTGC ATGTATACTACAGCATTTGATGGCTTGATGAACACTTAACATAAAATGTTTAGGATCATTGTTAATCTTACATGGTACCCGAGTTTGTGTTAACTTAAAA TGTTTATGAGCATTTGTTCCTCAACAATGGGAAATCTCTTTGCATTTTGGCGTAATCAAGAATCTTGATTCTTTTCTCATGCCTTCAAGATTCAAGAATT CGTGATTTTGATGAACTAACACTAGAACACAATGCTATATATATATAAATATAGATTGTGATGTAATTTATAATCACATTATTGAGTTGTGGATTTGCCT GATTTTGTCGATGTTACTTTGTCACGTATATAGGAGAAGGAAGACTCGAAGAAGGATATTTTTCCTGAAGTGTCACAATGGATGTGCGGGGCAGCAGGTT TTCCTTTTGCAAGATTTTTTTTACTGGACTTAGTCCCGATAACGTTTTTGGGTTTTCAGCTCTGATCTTTCCCCGATCTATAATATGCGTCAGGTAATGC AACCGCCTCTGGTTATGAGGACCTTGAGTCAACTGAAGGATGGCTTGCAGAGTGCTTTAACGATGCTGAGATGCAATTCAGTCCTGATGATTTGAATTTT TCAGGGGCAAATGATGTTCAGTTTGATGTTGCAGGGCTCAATGATACAGCACCATCATCTGAACAAAATGTGGTTCAGCAGCCAGTAACTCGAACCCGCG GAAATATTATCGTTAAAGGTAGGAAATATTTTATAAGGACACCCACAAAGTTGGCTTCTTATGTGGCTTATCCATTTGCCTTCCTTAAACCCAGTGGTGC CCATGGAGATGTAACTTTAAAGGAAATAAATCGGCGCATTCGGACTCCACCTCCTTCAAAATCAAATCAAAGCAGTGAAGATCCATCTGCTTACCCGAAA TCGGCCTTCTCCGGTAAGCCTGTGGTTGGCAAAACTAAAATTCGCACCGAAGGGGGAAAAGGTAGCATCACAATTATGAGAACTAAGGGCTAAGCATACG ATGTTCAGTACTAACTTTTGTCCCGCTCGTCAACGTGTGCGGTCTGACTTCACTTTCTGCAACATACCTAGCAGATTATAGAAGTTGATACTGCAAGTTT TTTGTTCTTATTGATATATAAATTACACCACCTTAGTGTTTGTTTGTTTCATAGTAGGGTCTAGAATTCTTGGATAATCTTGTAGCTTTTCCTTTTGGTA CATGAATTTGTTTGAGCTAAGTCTTAAATCATAACCTTGATGTTTCTTAGCCCCTTAGTCCCCTAGCTTTGGAAATGGCAATTTTACTAAGCTTGTGCTT AGCTTTTGTAATTGAAACATACATATTTAGTTTATGGCCTTGTTTATGAAGTCTTGTTTTTACCCTTTTCTTACAAAGTTGCATAAGGCTCACACATATA TATGTGCTGCATTTGTTTATCTTTCTAAATAGAAATATTGTGATTGAGGATGTTAGAGAAAGATGGATGGAAATAGCTAAGTTATTT BLAST |
| Tissue | pods |
| Gene name | LI_gene_151532; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_499874
| Blastp | Protein XRI1 from Arabidopsis with 59.56% of identity |
|---|---|
| Blastx | Protein XRI1 from Arabidopsis with 56.55% of identity |
| Eggnog | NA(ENOG410YGP1) |
| Kegg | Link to kegg annotations (AT5G48720) |
| CantataDB | Link to cantataDB annotations (CNT0001513) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019449093.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |