Ll_transcript_500803

• Id Trinity: TRINITY_DN47309_c4_g2_i1
• Name Transcript: Ll_transcript_500803
• Sequence: GCCATGTATCTTCCCTCACTTGCATCTCTTCTTTCTCGCTCTTTAATTTCTGTCACTTTCATATTTCTTACAACATCAGAAGTAAGAAAGAAAAATAAAA AAGAAACTTACTATTCATGTTCTTGGATTTGAAGTTCAAACTTCAAACTAAGATCTATTCTCTATTTTCAGACACATAATTTTTTTCTCTAATCTCAAAT CCAAATGTCTTAGTTCTTTCTTTCTTACAAAAACAACACCCTTTTCTCATGCTTCTGTTCTAATCTTTTTATATAATTAAATATTAATTTTATATTATAA TGGATTCACTCTTCTCTTCTCAAAACCCTACTAACCCCACTTTCCTTCCTCCACCGCCCGGAATCCCTTTCCCCGCCGCAATAACCACCGCCACCGTACC CAATGGTGTAACCACCCCCCCCAGAACCCCAACACCGATTCTGATACCAAAGCTTGAACCTTTTGAGGGATGGGTTGAGACCCAAAAGACCCAAGAGACT CAACAACAAACCACTTTTTCAAATGGGCCCCACACTCTTCTCAACCTATTTGGTGATGAAACCCTAGCTTCTGCTTCTTCGGACAAAAACGGCACCGTTT CGGACTTCAACCAAATTGCTGAGGTTTTTAGGACTGCATTCTCTAAGGGTTTGCAGCAATTTCAAGTGCCTAAAGAAGAAAACGACACCGTTTTGGACCC TGAGTCTGGTGCAATTGTTCCCGTGCCACCGCCGGAGTATAATAGTAACAGCAGCAACAAGGACTCTCCGGGGGCGGTGGCACTATCCACGCCACGAAGC AGAGTGAAGGAACTTGTGAGGGTCACTGATTTTGGGGGGATCAAGGAGCAGCGGCATTTTCGCGAGGTGGTGAGGAAGACTAGGATGATTTATGATTCGT TGCGGGTGTTATCGACAGTGGATGAGGAGAGGAGGGTGGAATTGGATCATAGGAGGGTGAGAGCAGACTTGAGAGCTTCTAATTTGATGAGGAATTGTGG GTTGTGGCTTAATCGCGATAAGAGGATCGTTGGCGCGATTCCGGGTGTTTGCATTGGTGATGTGTTCCTTTATAGGATGGAATTGTGTGTGGTTGGGTTA CATGGTCAACCACAAGCTGGGATTGATTATCTTCCTGCTAGTTTTAGTGCCAATGGTGAACCAATAGCTACTAGTGTTATAGCTTCTGGTGGATATGAGG ATGATCTTGATGAAGGTGATGTTATCATCTATTCGGGTCATGGAGGCCAAGACAAGCATTCTAAGCAAGTTTTTCATCAGAAGTTGGAAGGAGGGAACCT TGCAATGGAGAGAAGTATGCATTATGGGATTGAAGTGAGGGTTATTCGGGGGGTTCGGTGTGAAGGAACTGCATCGGCTTCGGGTAAGTTGTATGTTTAT GACGGGCTGTATAAAATTGTTCATTGCTGGTTTGATGTTGGGAAGTCTGGTTTTGGTGTTTTTAAGTATAAGTTGTGTAGGATTGATGGGCAAGCTAAGA TGGGTAGTTCAGTGCTGAAAGAAGCTAATAAGCTTAGGAAAGATCCATTGAGTTTTAAACCTATGTGTTGCCTTTCTCTTGATATTTCGATCAATAAGGA GTATGTCCCGGTTCGTCTTTTTAATGACATAGATCAGAACAATGACCCTCTCTATTACGAGTATCTGTCGAGAACAACTTTTCCCGACTTTGTGTTTCAT CAAAGTGGAAGAGCTACAGGTTGTGAGTGTGTGGGCGGTTGTGTTGATGGTTGTTTTTGTGCTATGAAAAATGGAGGTGAATTTTCATATAATCAAAATG GGGTTCTCTTGAGAGGGAAGCCTGTAATTTTTGAATGTGGTCCTTTTTGCTGCTGTCCCCCTCATTGTCGGAACCGTGTTACACAGAAGGGGCTGAAACA TAGGTTGGAAGTATTTAGGTCTAGGGAAACTGGTTGGGGAGTTAGGTCTTTGGACCTTATTCAAGCTGGTGCTTTTATCTGTGAGTACACAGGGGTTGTC CTGACTAAGGAGCAAGCCGAAATTTTGTCGATGAATGGCGATTCATTGATATATCCGAATCGGTTTTCTAATAGGTGGACGGAGTGGGGGGACTTATCTC TGATAGACTCCAATTACATGCGTCCATCATATCCATCAATTCCTCCTTTAGATTTTGCTTTGGATGTGTCAAGAATGAGGAATGTCGCTTGCTATATGAG TCATAGTTCGACTCCAAATGTGTTCGTTCAGTTCGTTCTCTATGATCACAATAATTTGATGTTCCCGCACCTAATGCTATTTGCAATGGAGAGCATCCCG CCAATGAGAGAGCTCAGCCTTGATTACGGGGTGGCTGATGAGGTGGCAGGGAAGCTCTCTATCTGTAACTGAATTATTTTGGAAGGTTCCTACATTGTTT AATATTTTGAAGCTGAGTTTTGGGCAATGTTCACCGAGAATTCAAATCGACGAACCCTAACTTTCAGAAAGTTCCGACCTCACCTGATTTATAATGAAAC GTCGAAATTGCTTGCTATATAACTGTCAGGTTATCAAATATGATGACTCAATATCGTTTTATATTTTGGCTAATACATGGCGACCATGTGTCAGGAAGAT AAGGAAATGGAGTTTCTCCTATCTGATTAATCTTGAACAAAGCATATTTTGATATATGATGACCAGATTTTGTAAGCAATTAGTGCAGCTGTATTAACTT TTATTTGGGTACTTGTATATAATAATGTAAGCTCAGCTTGTAATAACAGATGATATGTTATAGTAGTGGTTAGAAATGATAGATGCCCATTTGAAATGAG CATTTTATTGTTTTACAAGTATACAAGTCCATATTATTGTTATTCAGATTCCAAGGTATAGCAAATGCTGTTAATCATATTGTTTGATGAAATGCAATCT ATGATGCATTTGCTAAGGTAATTGTTATGAGGAATGGACAAGTTGGTTGATATATATGACCCAATGGTAG
• Tissue: pods
• Gene name: LI_gene_151599;
• Additional information: details;

Expression of Ll_transcript_500803

FPKM

• PAB: 7.3
• PNAB: 7.3
• PS1: 7.8
• PS2: 5.2
• PS3: 8.1
• PW1: 4
• PW2: 4.5
• PW3: 4.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_500803

• Blastp: Histone-lysine N-methyltransferase family member SUVH9 from Arabidopsis with 59.28% of identity
• Blastx: Histone-lysine N-methyltransferase family member SUVH9 from Arabidopsis with 58.93% of identity
• Eggnog: ubiquitin-like with PHD and ring finger domains 2, E3 ubiquitin protein ligase(COG3440)
• Kegg: Link to kegg annotations (AT4G13460)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019461893.1)
• Pfam: SAD/SRA domain (PF02182.16)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;