Ll_transcript_501616

Id TrinityTRINITY_DN47310_c0_g1_i3
Name TranscriptLl_transcript_501616
SequenceATCTTCTTAAAATCTCTAAGTTGTTCTCAACACTACCTACTTATCAATTCTTATAGTTTGAACTAGTATGTAAATATGAACAATTAAATTTTTATAGAAT GAATGGTTAAAATATAAAATATGTTTTTTTAATTTACTTCTAGAGCAAGTGTACCATTTCCCCTATAAAAATATAATTTAAATTTTCTATTTTATAGTTT TGAAGCTCAACATATTTTTTCCTACCTTAAAAATTCAGCTTGAAAACTTTTCTGTTTATGTTTGAAATACACCTAGTTACGATTTGACTTGAATTTTGCA TTTAACAAATCCTAATTTTCAATTGGAATCAATTCCTTTTAAAAGTGAAAGAAACTTAAATATTTTTTAAATCTAAATAAAAAAACTCCTAAAATACTTT TGATTCCATAGACCGGGTTACAAAACAAGTACAAGGAAGAAGGTTTTGAGAATTGGTAATAACGCGTAAATCTGCGCCAGAGAACAGTGACAGAAGCAGA ATCAGGTTAGCGTGTGGCAATGGCGGAAGAGCAAAGTGAGTTGAAGATTTACAACTCCATGACTAATGAGAAAGAGATCTTCAAACCCAAAGAACCAGGC AAGGTTTCCATGTATGTCTGTGGAGTCACCGCTTACGATTATAGCCATATCGGTCACGCTCGTGCCGCTGTTTCTTTCGATATCCTTTTAAGGTACCTTA AACACTCCGGGTATGATGTAACATATGTGCGAAATTTCACCGATGTTGATGATAAGATAATTAAGCGTGCAAATGAGACTGGTGAAGATCCTTTGGAGTT AAGCAACCGTTTTTGTGATGAATATGACCTTGATATGGCTTATCTCCAGTGTGAGAGACCTTCTCGGGCGCCTCGTGTTTCTGCGCACATTGATGAGATA AAGGACATGATAATTCAGATAATCAACAATGGCTATGCATACGAAGTTGATGGTGATGTTTTCTATGCTGTTGAAAAATTCCCAAATTATGGCATGCTGT CTGGACAAAGGCTAGAACATAACAGAGCAGGGGAGCGAGTTGCTGTTGACTCAAGAAAGCACCACCCTGCTGATTTTGCATTGTGGAAGGCGGCTAAACC TGGTGAGCCCTACTGGGACAGTCCTTGGGGTCCTGGAAGACCTGGGTGGCACATTGAGTGCAGTGCAATGAGTGCTTGTTATTTAACTCATAAATTTGAT ATTCATGGTGGTGGAATTGATTTAATCTTTCCTCATCATGAAAATGAGATTGCTCAGAGCTGGGCTGTGGACAAAGAGAGCAATATCAGTTATTGGTTGC ATAATGGGCACGTCACTAATAATAATGAGAAGATGTCAAAGTCCTTAGGCAACTTTTTCACTATTCGCCAGATCATTGTGCGTTACCATCCGCTTGCATT GAGACACTTTTTGATTAGTGCCCATTATAGATCTCCATTAAATTACTCAATTGCACAGCTGGAGAGTTCATCTGATGCTATTTATTATATATTTCAGGTA AACAATCCATAAATAGTCTCTATCAGAAATTATGAGTTGTTGCTTAGATTTGATGGACGAGTTCATCTCGAGGTTGAACAACTTTTTCAATATGTAATTT GAAATTGTGTATATTTGGGATTGTGTTCCAAGGGATGATGTCACATGTTTTTGTGCATAAAGCAAAGTTTTTTTTATTGGGTTTTGGTGCCAATCTTGTT TAATATGATCCTGATATCCTGTTGCTGGTGGTTTATGCATTTCCGCTATGATGGGAATCTATTGATATTAAGTATTATAGCTCCAGATACGTATGTCCAA CTTAATAGATTTTACTACTCAAGTGAAATTGTTCAAAAACTGGTTATATTTACTTCTGTTATGTTCTTAATTATGAGAAGGATTTTGATCTTTTGGTTGT TAGACTCTTCAAGATTGTAAAGATGCTTTATCATCATTTCAACAAGAGGGCACTGAGGAAAATAAAAAAGCGCCTCAAGTGGAAGAGGCTGCCAAGGAGT GCATTAAGAAGATGCGTATTGAGTTTCAAACCAAAATGTCAGATGACTTACAAACACCTGTAATAATAACTGGTTCAATCCAAGAGGCCTTGAAATATAT CAACAATTGTTTGAAGAAGCTGAAGAAAAAGATGCAGAAAAGGGCACAGTTGCAATTGATTCAATCACTAATTGAAGTTGAGAAAGAAATTGGAAAAGTT CTGGACGTACTAGGATTTTTGTCCTCTAAATCCTATGTCGAGATTCAATCACGAATTGACGTTGACAAAGATATTGGAAAAGTTCTGGATTTAGTTGGGT CATTGCCCACTAACTCCTATGCTGAGGTTCTGAAGGAGTTGAAAGACATGGCATTGAAGAGAGCAGGTTTAACAGAGGATGAAGTACTAAGTCTGATAGA AGAAAGAACTCAAGCAAGGAATAATAAGGATTTTCCTAAGAGTGATAAGATTAGGACTGATTTAACTGCTAAAGGCATAGCACTTATGGATGTTGGCACT GAAACAATTTGGAGACCATGTATCCCAAGTGAACCACTTGAAGCCGAAGTTGTACAGAAGGCACATATAGTTGAAGAAAAACAGTCGACACCTCCGGTGA ATCAAAAAGTGGAGGGAGAAGGGAATGGGCCAAATACTGCATCAACATGAAGGTGGGTCAATGTCCCCTCCATATAGCTACAATTGATACAGAACTATTA GTAATTTATGAATATTGTGACATTAGAAGGCTTCATTTGTATAACAGTTACAGGCTATAAGACAAAGTTCCTTGGTGTGTAGGACGTGAAACATTTCACA TTTTCGCTCTTTTGGACCCTTTGATTATATGAACAGAGCCTCATACAGATATGGTTTTTTTAAGAGTCAAATTATTTAAACATCAAGTTCTTAATATCAC ATTTAATAGCGTATACATTTTTTTCTATCTCTAATGTACTTTTATCTTATCTGGATACATGGATCCTGGG BLAST
Tissuepods
Gene nameLI_gene_151610; 
Additional informationdetails; 

Expression of Ll_transcript_501616

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_501616
BlastpCysteine--tRNA ligase, chloroplastic/mitochondrial from Arabidopsis with 70.72% of identity
BlastxCysteine--tRNA ligase 2, cytoplasmic from Arabidopsis with 70.03% of identity
EggnogCysteinyl-tRNA synthetase(COG0215)
KeggLink to kegg annotations (AT2G31170)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019428592.1)
PfamtRNA synthetases class I (C) catalytic domain (PF01406.18)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;