Ll_transcript_501621

• Id Trinity: TRINITY_DN47310_c0_g1_i5
• Name Transcript: Ll_transcript_501621
• Sequence: ATCTTCTTAAAATCTCTAAGTTGTTCTCAACACTACCTACTTATCAATTCTTATAGTTTGAACTAGTATGTAAATATGAACAATTAAATTTTTATAGAAT GAATGGTTAAAATATAAAATATGTTTTTTTAATTTACTTCTAGAGCAAGTGTACCATTTCCCCTATAAAAATATAATTTAAATTTTCTATTTTATAGTTT TGAAGCTCAACATATTTTTTCCTACCTTAAAAATTCAGCTTGAAAACTTTTCTGTTTATGTTTGAAATACACCTAGTTACGATTTGACTTGAATTTTGCA TTTAACAAATCCTAATTTTCAATTGGAATCAATTCCTTTTAAAAGTGAAAGAAACTTAAATATTTTTTAAATCTAAATAAAAAAACTCCTAAAATACTTT TGATTCCATAGACCGGGTTACAAAACAAGTACAAGGAAGAAGGTTTTGAGAATTGGTAATAACGCGTAAATCTGCGCCAGAGAACAGTGACAGAAGCAGA ATCAGGTTAGCGTGTGGCAATGGCGGAAGAGCAAAGTGAGTTGAAGATTTACAACTCCATGACTAATGAGAAAGAGATCTTCAAACCCAAAGAACCAGGC AAGGTTTCCATGTATGTCTGTGGAGTCACCGCTTACGATTATAGCCATATCGGTCACGCTCGTGCCGCTGTTTCTTTCGATATCCTTTTAAGGTACCTTA AACACTCCGGGTATGATGTAACATATGTGCGAAATTTCACCGATGTTGATGATAAGATAATTAAGCGTGCAAATGAGACTGGTGAAGATCCTTTGGAGTT AAGCAACCGTTTTTGTGATGAATATGACCTTGATATGGCTTATCTCCAGTGTGAGAGACCTTCTCGGGCGCCTCGTGTTTCTGCGCACATTGATGAGATA AAGGACATGATAATTCAGATAATCAACAATGGCTATGCATACGAAGTTGATGGTGATGTTTTCTATGCTGTTGAAAAATTCCCAAATTATGGCATGCTGT CTGGACAAAGGCTAGAACATAACAGAGCAGGGGAGCGAGTTGCTGTTGACTCAAGAAAGCACCACCCTGCTGATTTTGCATTGTGGAAGGCGGCTAAACC TGGTGAGCCCTACTGGGACAGTCCTTGGGGTCCTGGAAGACCTGGGTGGCACATTGAGTGCAGTGCAATGAGTGCTTGTTATTTAACTCATAAATTTGAT ATTCATGGTGGTGGAATTGATTTAATCTTTCCTCATCATGAAAATGAGATTGCTCAGAGCTGGGCTGTGGACAAAGAGAGCAATATCAGTTATTGGTTGC ATAATGGGCACGTCACTAATAATAATGAGAAGATGTCAAAGTCCTTAGGCAACTTTTTCACTATTCGCCAGATCATTGTGCGTTACCATCCGCTTGCATT GAGACACTTTTTGATTAGTGCCCATTATAGATCTCCATTAAATTACTCAATTGCACAGCTGGAGAGTTCATCTGATGCTATTTATTATATATTTCAGACT CTTCAAGATTGTAAAGATGCTTTATCATCATTTCAACAAGAGGGCACTGAGGAAAATAAAAAAGCGCCTCAAGTGGAAGAGGCTGCCAAGGAGTGCATTA AGAAGATGCGTATTGAGTTTCAAACCAAAATGTCAGATGACTTACAAACACCTGTAATAATAACTGGTTCAATCCAAGAGGCCTTGAAATATATCAACAA TTGTTTGAAGAAGCTGAAGAAAAAGATGCAGAAAAGGGCACAGTTGCAATTGATTCAATCACTAATTGAAGTTGAGAAAGAAATTGGAAAAGTTCTGGAC GTACTAGGATTTTTGTCCTCTAAATCCTATGTCGAGATTCAATCACGAATTGACGTTGACAAAGATATTGGAAAAGTTCTGGATTTAGTTGGGTCATTGC CCACTAACTCCTATGCTGAGGTTCTGAAGGAGTTGAAAGACATGGCATTGAAGAGAGCAGGTTTAACAGAGGATGAAGTACTAAGTCTGATAGAAGAAAG AACTCAAGCAAGGAATAATAAGGATTTTCCTAAGAGTGATAAGATTAGGACTGATTTAACTGCTAAAGGCATAGCACTTATGGATGTTGGCACTGAAACA ATTTGGAGACCATGTATCCCAAGTGAACCACTTGAAGCCGAAGTTGTACAGAAGGCACATATAGTTGAAGAAAAACAGTCGACACCTCCGGTGAATCAAA AAGTGGAGGGAGAAGGGAATGGGCCAAATACTGCATCAACATGAAGGTGGGTCAATGTCCCCTCCATATAGCTACAATTGATACAGAACTATTAGTAATT TATGAATATTGTGACATTAGAAGGCTTCATTTGTATAACAGTTACAGGCTATAAGACAAAGTTCCTTGGTGTGTAGGACGTGAAACATTTCACATTTTCG CTCTTTTGGACCCTTTGATTATATGAACAGAGCCTCATACAGATATGGTTTTTTTAAGAGTCAAATTATTTAAACATCAAGTTCTTAATATCACATTTAA TAGCGTATACATTTTTTTCTATCTCTAATGTACTTTTATCTTATCTGGATACATGGATCCTGGG
• Tissue: pods
• Gene name: LI_gene_151610;
• Additional information: details;

Expression of Ll_transcript_501621

FPKM

• PAB: 2.8
• PNAB: 9.2
• PS1: 16.5
• PS2: 5.3
• PS3: 11.7
• PW1: 15.5
• PW2: 12
• PW3: 6.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_501621

• Blastp: Cysteine--tRNA ligase 2, cytoplasmic from Arabidopsis with 61.19% of identity
• Blastx: Cysteine--tRNA ligase 2, cytoplasmic from Arabidopsis with 61.01% of identity
• Eggnog: Cysteinyl-tRNA synthetase(COG0215)
• Kegg: Link to kegg annotations (AT5G38830)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019428592.1)
• Pfam: tRNA synthetases class I (C) catalytic domain (PF01406.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;