Ll_transcript_501625

• Id Trinity: TRINITY_DN47310_c0_g1_i7
• Name Transcript: Ll_transcript_501625
• Sequence: CGTTACAAAACAAAGAGAGGGTTTTGAGAATCAGTAACATTGAGAGCGTGTGACAATGGCGGAAGAGAAAAGTGAGTTGAGGATTTACAATTCCATGACT AATGAGAAAGAGATCTTCAAACCCAAACAACCTGGCAAGGTTTCAATGTATGTTTGTGGTGTCACTGCTTACGATTATAGCCACCTTGGTCACGCTCGTG CCGCCGTTTCTTTCGATATCTTCTTCAGGTACCTTAAACACTTAGGGTATGAGGTAACATATGTGCGGAATTTCACCGATGTTGATGACAAGATAATTAA GCGGGCAAATGAGACCGGTGAAGATCCTTTGAACTTGAGCAACCGTTTTTGCGATGAATATGATCTTGATATGACTTATCTTCAGTGTGAGAGCCCGTCT CGGGTGCCTCGTGTTTCTACGCACATTGGCGAGATAAAGGACATGATAACTCAGATCATCAACAATGGCCATGCTTATGAAGTTGATGGTGATGTTTTCT ATGCTGTTGAAAAATTCCCAAATTATGGCATGCTGTCTGGACAAAGGCTAGAACATAATAGAGCTGGGGAACGAGTTGCTGTTGACTCAAGAAAGCGTCA CCCTGCTGATTTTGCATTGTGGAAGGCTGCTAAGCCTGGTGAGCCTTCTTGGGACAGTCCTTGGGGTCCTGGAAGACCAGGGTGGCACATTGAATGCAGT GCAATGAGTGCTTGTTATTTAACTCATAAATTTGATATTCATGGTGGTGGAATTGATCTGATCTTTCCACATCATGAAAATGAGATTGCCCAGAGCTGGG CTGTGGACAACGAGAGCAATGTCAGTTATTGGTTGCATAACGGGCACGTCACTAATAATAATGAGAAGATGTCAAAGTCCTTGGGCAACTTTTTCACTAT TCGTCAGATTATTGAGCGTTATCATCCGCTTGCATTGAGACACTTTTTGATCAGTGCCCATTACAGATCTCCATTAAATTATTCAGTGGCACAGCTGGAG AGTTCATCTGATGCTGTTTATTATATATTTCAGGTAAAAATCCCTAAATAGTATGTATGAGAAATTCTGCATCGTTGTTTATTGTTAATGGACACAAGCT CATCTTGAGGTTGAGCAGTTTCTTCAATATGTAATTTGAATTAGTATTCACAGATGTGATATGCTTTTGTGAATCCTTAAATTAGAGTTTGTTATAATTT ACAAGTTAAATAGGGAAAACGTAATTAAATAAAACTGTTTTTTATTGGGTTCTGGTTCAGTCTTATTTAATATAATCCTGTTGCTGCTAGTTTATGCAAT TTTGCTACGATTTGAATCTATTGACAGTAAATATTACAGCTATAGATGCCTATATAATGCAACTTAATGGATCCTATTGCTCAAGGGGAACTGTTCAATA ACAGTTCATTTTTAATTTTGTGGTGTCCTTAATTATGAGAAGAATTTTGTTCTTGTCGATGTTAGACTCTTCAAGATTGCAAAGATACTTTATCATCACT TCAACAAGAGGGCACCGATGAAAAGAAAAATGTTCCTCAAGCTGAAGAGGCAGCCAAGGAATGCATTAAGAAGCTGCGTATCGAGTTTCAAACCAAAATG TCAGATGATTTTCAAACACCAGTAATAATAACTGGTTCTCTCCAAGAGGCCTTGAAATATATCAACACTTCTTTGAAGAAGCTGAAGAAAAAGATGCAGA AAAGGGCACAGTTACAATTGATTCAATCACTAATTCAAGTTGAGAAAGAAATTGGAGAAGTTCTCGACTTACTAGGATTTTTGTCCTCCAAATCCTATGC CAAGATTCAATCACAAATCGAAATTGAGAAAGATATCGCGAAAGTTCTGGGCTCACTAGGATCAATTCCAACTAATTCCTATGCCGAGGTTCTGCAGGAG TTGAAAGACAAGGCATTGAAGAGAGCAGATTTGGCAGAAGATGAAGTACTAAGTCTGATAGAAGAAAGAACTCAAGCAAGGCTTAATAAGGATTTTCCTA AGAGTGATAAGATTAGGACTGATTTAACTGCTAAAGGCATTGCACTAATGGATGTTGGAAATGAAACAATTTGGAGACCATGCATCCCAAGTGAACCACT TGCAGCAGAAGTTACACAGAAGGCACCTATAGTTGAAGAAAAACAATCAACACCAACAGTGGATAAAAAAGTGGAGCAAGAAAGGAATGTGCCACAAACT GCATCAACATGAGGGTTGATCAATGTCACTCCACATAGCTATGATTTATATAGAACTGTTTAATAATTTATCAATGTTGTGACATGAGGAAGCTTCATTT GTATAACAGGTGCATGCTAAGACAAAGTGCCTTGGTGTTTAGGACTTGGAATCATTTTACAATTTTACTCATTTTTGGGGTGCTATATATGTTTGGCCTG TTAAACATGTCAACTCAATCATGTCTCTACCTGGATTACGGTGATTGAGAAGTGATAGTAAAAATAAAAATAACTTATAAATGATGATGGGTGATGTACA AATTTTGGATGATGGTTAGAAGTGATAATAAATTAGTGCTTGTGTTGAACAATTGTTTCGATGTAGTATTGGCACTCGTATTCGAGTTCATCGGAGGAAG TTGTTGAATCCGATGCTGCATCGGCTTTAGGTGCACATTGGGGAAGTGAGGATCAATTGAGAGTGTGAACTGGTTATTTTTTGAAGAATCCAGGGCTGTG AAAGGTTTCAGAGTATGTGTTTATTTATAATAAGAGTTGTAGGTTATTGCATGTTATTTAGATTATGCGATTATTACACATGCAAATTGAATATCCTCAA AAGTTGAGAAAGCAAC
• Tissue: pods
• Gene name: LI_gene_151610;
• Additional information: details;

Expression of Ll_transcript_501625

FPKM

• PAB: 0
• PNAB: 0.2
• PS1: 0.1
• PS2: 0.2
• PS3: 0.7
• PW1: 0
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_501625

• Blastp: Cysteine--tRNA ligase, chloroplastic/mitochondrial from Arabidopsis with 69.47% of identity
• Blastx: Cysteine--tRNA ligase, chloroplastic/mitochondrial from Arabidopsis with 69.47% of identity
• Eggnog: Cysteinyl-tRNA synthetase(COG0215)
• Kegg: Link to kegg annotations (AT2G31170)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019453015.1)
• Pfam: tRNA synthetases class I (C) catalytic domain (PF01406.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;