Id Trinity | TRINITY_DN47320_c1_g1_i3 |
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Name Transcript | Ll_transcript_501028 |
Sequence | TGCTTCTTATCCGTTTCTTTTTATTTTCTATTTTTATTCCTTCACGCTTCTTAATTAATTCATCTCTTATCAAATTTATTCACCCATTAATTTTTTATCA TTCCATGGCCTGAAAATTAAGTTCTATACAATTCTCAACAGAAAAAGAGGAGTTTTTTATGGAGAACGGAGATATTCCTGAGGATGCCAATGAGCATTGC CCAGGTCCTCAGGCAGAATCTGCAGGAAAATCTGATGCATGCGAAGGATGCCCAAACCAACAAATTTGTGCCACTGCCCCCAAAGGACCTGACCCTGGTA CTCTCTCACTCTCTCTCTCTACTGTTATCACTTTCATTATCTTATGCTTGTATGTTTCAACTGAATTCCTCACCTACCTGATGGTTAATATTATCCGCCT AATATTCAAATATTTTGAGTTGCCATCTGCATAAAGTGAAATAACTACACGTCAAAAGAGAAGAAATAGAGGCGGTGGACTTAAGCTAACAGGGCATAAT AAAATACCTCCCAAATTATACTTTAGCGTGTTTCTCGTGGAGGTCAATGGAAAATGCCCACTAAGGTCATTAATATGGAGTTCTTCATTGTTTTGTGACA AGATATTTATAACACTCTGTATCCAAGAGTATGCCACCACAACTGCTTAAATTCCAATATGACTGAAGCCTATGTGTGGCATAGCATTTTTCATTTACTT AGTGACAAGATGTTTACAACACACTGCATCCATGAGCATGATGCCTCAACTGTATGAATAATTTTCTATTCCAATATGACTAAAATATAGGGGTCACTGA ACATCTTTCCATTAACTCATGATGGTCTCAACTCAACAACATTGATTCATTTGCGCCACATATAAAAGAAAATGGAATTACACAAGAAAAAATCTATCCT TTAATCTATTCTGTCAAATCAATAGATTCTGTATCCTGCTTGGTTTCAAAGCAGAAATTTGGCCTTTGAGGCTGCATTTCTCTTAATTCAGAGTATTCAA ATTGATACACTAATATCCTGTGATACGTCATATGCATTGTATGACAGTTATTCAAATCTGGTGCAGTACGGTTAATGGTGCATAGTAAAATTGTGTTCTA TACATTTCTTATGATACTAACTATTATTATCTTGTAAATATTCTTTCCGCTTCTTAATTCCCCCCTCTTTTTGATGGTTATTAGCCTTGATAAATTTTAT TCTTAACGACAAAGATAACTGCTTTCTTTGTTATCAAAATAGATAATTATTTTCTTGTGATATATTGCTGAACTCAGGTCCTAATTATTGGTCAGTTTGG AGGGGAGTAAACAAAATTTTGTCTCATGATAGATTTACTTTGTTGTGATATTATCTGCCTTAAGAACCTTGGTCACCTTGTCTTTTGCTTTTGTTTATAT AGATCTGGTTGCCATTGCTGAAAGAATGGCTAATGTGAAGCATAAGATATTGGTCTTATCAGGGAAGGGGGGAGTTGGCAAGAGTACATTTTCCGCCCAG CTGGCCTTTGCTTTAGCAGCAAAGGATTTTCAAGTGGGTCTTCTTGACATTGATATTTGTGGTCCAAGCATCCCAAAGATGCTTGGCTTAGAAGGTCAGG AGATACATCAGAGTAACCTTGGGTGGTCTCCTGTTTATGTGGAGTCCAATCTTGGTGTCATGTCAATCGGGTTCATGCTTCCTAATCCTGATGATGCCGT TATATGGAGAGGTCCACGCAAAAATGGGCTTATCAAGCAATTCCTAAAAGATGTCTATTGGGGTGAGCTTGATTTTCTAATTGTTGATGCTCCACCTGGA ACCTCGGATGAACACATTTCTATTGTTCAGTGCCTTGATGCCACTACAGTAGATGGTGCAATCATAGTTACTACTCCTCAACAAGTCTCTCTTATTGATG TGAGAAAAGAGGTGAGTTTTTGCAAAAAAGTTGGAGTTAAAGTTCTCGGCATTGTAGAAAATATGAGTGGCCTATCCCAATCCATCACGGATTTGAAGTT TATGAAATTGACAGATAGTGGTGAGCAGAAAGATGTCACGGAGTGGGTTATGGAAATCATGAGGGAAAAATCACCAGAATTGCTGAATTTAATTGCTTGT AGTGAAGTATTTGATAGTAGTGGTGGTGGAGCAGTGAAGATGTGCAGCGAAATGGGTGTACCCTTTCTTGGTAAAGTTCCATTAGATCCACTGCTCTGTA AGGCTGCTGAAGAAGGTAGATCTTGCTTTGCTGATACAAGATGTGTTTCAAGTGCTCCTGCATTAAAGAAGATTATTGAGAAGTTGATGGAAACTAATGG GTTTTCAATGTTAGTTAGTAATGGAGTGTAGGGAGTTTGCTCTTTGGGTGATTTTTGTTAATCGAAATAAAGTTTTATACCTGGTTTAAAGCATGTATAA AAGCTAATATACAGGGGCTGTTACATTTTGGGATTAGAAGTATTTTTTTTCTGGGTGGCTATGTTTATGAACTTCACAATGAAAATTTTAATAGCAGACA AAATTGCAGTAAAATAATTTTTCCATTGTTATTGACATTGTAAGTTCTATAGTGAGTATCATATCATAATCACTTATTC BLAST |
Tissue | pods |
Gene name | LI_gene_151665; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_501028
Blastp | Cytosolic Fe-S cluster assembly factor NBP35 from Arabidopsis with 78.77% of identity |
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Blastx | Cytosolic Fe-S cluster assembly factor NBP35 from Arabidopsis with 79.33% of identity |
Eggnog | ATP-binding protein(COG0489) |
Kegg | Link to kegg annotations (AT5G50960) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019424185.1) |
Pfam | NUBPL iron-transfer P-loop NTPase (PF10609.8) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |