Ll_transcript_500395

• Id Trinity: TRINITY_DN47328_c1_g1_i15
• Name Transcript: Ll_transcript_500395
• Sequence: CTGCAAGGCTGCAGAATGAGAAATACAAAGACAGAGTATGTGTCATGCCCATCCTGTGGTAGAACTTTGTTTGATCTTCAAGAAATAAGTGCAGAAATTC GGGAGAAGACATCACACCTGCCCGGCGTCTCGATTGCAATCATGGGTTGCATTGTGAATGGACCTGGGGAGATGGCTGATGCTGACTTTGGTTATGTGGG AGGTGTTCCTGGAAAGATTGACCTTTATGTTGGGAAGACTGTGGTAAAGCGTGGGATCGCAATGGAGCGTGCAACGAATGCCTTGATCGAGCTCATAAAA GAGAATGGACGTTGGGTAGACCCTCCAACTGAAGAGTAAACTCTAATAAAAGCCAATGATCATAGTGGTTTAGTGTTCTGTTTTATTATATGTAATGTAA GTACTGATTTTTTTGCTCATGACAAAATTGGCATAGCAGAAATAAGGAATTTCATTTAAATTATGGTTTGATTGAGGAACTCAGCAATTGCAATTTGCCT ATAACAACCACAACGTATATGCTTTGCACATTGCACCTATCAGCAATAATACAGTGATATAAACATGATTTCCTGTAACATTGCCAATTTAGATGTTATG GCACTTAGCATCATGTCATGGTTAAGACATTAAGACTCATGAGGGTGATTGAAAAATGTGTTAGTGTAATTTAAGAATCTTATAAGCTATATTGTAAACC AAAAAAAAATAAAAGGAAAAAAGACAATAGCATGAGGAGATAGAAAAGGAGAAGTAAAGAATATAAGCACAGTATTGAACAATTCTAGCTTTTGGCAAGA ATTAGGTACCTAGCATTACTCTTCAGAACCAACATTTCTGCATCATCTTACTTTTGTTTGTACATTAAATGTTTATTTATTATTTTACTTAGACTTTTGT TTATATTCCACATGTTCGGCTAGTGAATCATTCATTAGCCAACTTCCATTTCTTGTAGGCCAATACCCAACGACTTTATTTATCAG
• Tissue: pods
• Gene name: LI_gene_151740;
• Additional information: details;

Expression of Ll_transcript_500395

FPKM

• PAB: 15.1
• PNAB: 3.5
• PS1: 3.9
• PS2: 3.4
• PS3: 7.5
• PW1: 6.4
• PW2: 6.7
• PW3: 5.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_500395

• Blastp: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic from Oryza sativa with 91.07% of identity
• Blastx: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic from Oryza sativa with 91.07% of identity
• Eggnog: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity(COG0821)
• Kegg: Link to kegg annotations (4329911)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019448725.1)
• Pfam: GcpE protein (PF04551.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;