Ll_transcript_500378

• Id Trinity: TRINITY_DN47328_c1_g1_i3
• Name Transcript: Ll_transcript_500378
• Sequence: TCAGTGCAGCTTGAGGCATAGGCTTGATCATTGGACCAGCATTGGGAGGCTATTTGGCTCAGCACAAACATTGAGAATTTTCATATTGCAGTCAGTAGAG AAATACCCACATATATTTTGAAGGGTTCACTTCGGGATAAGTTTCCATACTTCTTGCACTGCTTTATGATATCATGTTTGGCGTTTATAGCAGCAATTGT GTGTATCTGGATTCCGGAAACACTTCACAATCACAATGGCGGCATTGAGTCACTTCACAATCACAATGGCGGCATTGAGTCACTTCACAATCACAATGGA AGAGTTTAACATGCGAAGACAAGACCGTCCAAAAGAATGAATACCTACTTCTTAATTGGCCCTTAATGTCAGCTATTCTTACTTATAGTGTTTACGCACT TCATGATATTGCTTACCAAGAGGTTTTTTAATTATGGGCAGCCAGTCCTTGAAGGTTGGGCAGTTTAAACTACATACAACTGATGATGTTGGTAATGTTC TTTCAATATCAGGTACACCTTTAGCTTACTCTATATATTACTATTAATGTTTGATTTGATACATGTTGCATTCCTAACTTTTCATATACGAAGATTGATC ATTAATTTCTTGCATTTGCATGAGGCCATACAGTATCTCCCTGCAAGAAATTTCCTCTTAATCTGGTATCAATTGAGTCATTTCACTTATTTTTATTTTC AAGCTTTGAAAATTTATTTCAGACACATCTGGGTTATGAATCAAATTTTGCATAGTGACTGTGACTTCATATAAGCATAATTTGATGTAGCATGGGAGGG GGCTATATCTTTCCCTTCTAACATGCTGAAGAACTTAATTGTCACAAGGCAAGATCAAGCTTTCATATGGATTTGGGAAGTTAAATTCTTTGAACTTTGT TACCACTTACATGATACAGAATTAGTCCTTTCTATTAACAATTGCTATTATCAGGATATCATAATTATGACACAGACATTGGTAACAGGAAAAAGTAAAT CCCAAGCAATGCAACTGGAGATGATGGTAACTAGTTTTTTATGAACTGACTCCTAGAAAGAAAATGGGCATCTAATACTGATTCATGAGTCTGTGAAAGG TGAAATGAGTCTATTAAAGGCTATTTGAATATTTAGCAAACAATTCTCCATTCACCACATTCAGTTTCCAAATGGGATTCACACGGATGACTTAGTGATT GGTGCTGGTGCTAATGCTGGAGCCCTTCTTGTTGACGGGCTTCTTTTAGAATCTCCAAACAAGGACTTTGACTTTCTTAGAAGTACATCTTTCAATTTGC TGCAAGGCTGCAGAAACTTTAAAGCATGGACAAGAGCTTGATTGGATTTAATAATATACATAGATGTGATGTTTATTTGTATGCCTAAATTGTGTTGTAG GAGTATGTCCTGTGGTAGAACTTTGTTTGATCTTCAAGAAATAACCCTTTTTATGAGCTCGGGAGAGGACATCACATATGCCAGGTGTCTCGATTGCAAT CATGGGTTGCATTGTGAATGGACCTGGGGAGATGGCTGATGTTGACTTTGGTTATGTGGGAGGTGTTCCTGGAAATATTGACCTTTATTTGGGATAGCAC TTAAAGTTTCACCTCATTTGATTATTATTTTATCACGGGTATGTTTTTGAAACTACAATCTTGCTGTTATATTCTTTTACTTATTTTGATAATAAACATT TAGTTTCTCT
• Tissue: pods
• Gene name: LI_gene_151740;
• Additional information: -

Expression of Ll_transcript_500378

FPKM

• PAB: 0.2
• PNAB: 0
• PS1: 0.8
• PS2: 0.1
• PS3: 0.8
• PW1: 1.1
• PW2: 0.2
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_500378

• Blastp: -
• Blastx: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic from Arabidopsis with 54.37% of identity
• Eggnog: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity(COG0821)
• Kegg: Link to kegg annotations (AT5G60600)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019448725.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;