Ll_transcript_501112

• Id Trinity: TRINITY_DN47339_c5_g2_i1
• Name Transcript: Ll_transcript_501112
• Sequence: GTGAGATTCATCACTATTTATTAATTGCACCTTTCTAACCTCTCTCTCTTCTTTTCTCTGAGTAAAAGTAAAATTAATATATGTGCCACCTTATATCCCA AGTTTCCATCACACTATAGTATCAAGCAGTGTGATTCACTTTTTCATCTCTGCAAACAAAGGGAGCAAAAGATGGCCCTATGTAACGAAATTATTGGTTC TTCATTCATAGAAAGATCCTCCACAAGAATCCATTTACAACAAAAACAAAACTTGTTCTTGGGTAGGTCTGGGTTTGTTCCTTTGAGAAACAGAAGAGTT GTGAGGTTGAAGAAGGTTGCTAAGTTTCCAGTGGCAGCTCTCAGTACAGATTTGGTGAAAGTTTCTTCTTCTTCTGTACCTGTAGAGAAACCAGTGAAAT TCAAGGTTCGAGCTGTGGTGACAGTGAGGAACAAGATCAACGAGGATTTAACAGAGTTACTTGTGAAGCGATTTGATGCTATTGCTGACAATTTTGGAAA CAGTGTTGGGCTTGAGCTTCTTAGCACCGATATTGATCCAAAAACAAGGGCTCCAAAAAAGACTAATGAAGCAGTGCTAAAGGGCTGGTCAACAAAATCC AATGTAAAAGCTGAAAGAGTTGATTACATAGCTGAATTCGTTGTAGACTCTAGTTTTGGACTGCCAGGAGCTATCACTGTTACAAACAGACACCAACAAG AGTTTTTCTTAGAAACTATAACCATTGAAGGATTTCCAAATGGAGCAGTTCATTTCCCATGCAACTCATGGGTACAAGCTAGGAAAGATCTTCCTGGAAA GAGGATTTTCTTTTCTAATAAGTCTTATTTACCTGGCGATACCCCTTCTGGGCTGAAATATTTTAGGGAGAAGGAGTTGAGAAATCTGAGAGGTGATGGT AAAGGGTATAGAAACTTATCTGACAGAATTTATGACTATGACATATACAATGATCTTGGAAATCCAGATCTTGGTAATGATTTTGCAAGACCAAATCTTG GAGGATCAGAAAAATATCCTTACCCAAGACGCTGTCGTACTGGCCGAGGCCCTATGGATTCTGATAATACTGCAGAGGTTCGAGTGGAGAAACCACTGCC AATGTACGTGCCAAGAGATGAACGATTTGAGGAGTGTAAGCAATACACGTTCGCTACTAAGAGGCTCAAAGGAGTGCTACATATCTTGATTCCTAGCCTT ATGTCTAGCCTTTCTTCCGAAAACGAAGACTTCAATGAACTATCTGATGTTGAAAGCCTTTATACTGAAGGGTTGCTCATTAAATTGGGATTCGAAGATG ACTTTTTGAAGAATCTCCCTTTGCCTAAAATGTTCAGCCAGGCCCAGAAATCCAGTCAGGGAATTCTCAAGTATGACATGCCCAAGATCCTTACTAAGGA CAAATTTGCTTGGCTGCGAGATGACGAATTTGCCCGTGAAGCAATTGCTGGAGTTAACCCAAGTAGCATTGAGAGGCTTAAAGTTTTCCCACCCGTTAGC AAGTTAGACCCTGAAATATATGGTCCATTAGACTCTGCTCTTAAAGAAGAGCACATTTTAAGTCAACTTAATGGCATGACCGTCCAACAGGCATTAGATG AAAACAAGCTGTTTATGATAGATTATCATGATATATACCTTCCATTTGTTGAAAGAATCAATGCCCTTGATGGTAGAAAATCATATGCTACTCGTGTTAT TTTTTTCTTGACACAAAATGGTACTCTCAAACCTGTGGCTATAGAACTTAGCTTGCCACCTGCTGGACCAAGTTACCAATCAAAACGTGTAGTTACACCT CCTCAAGACGCAACTAGCAATTGGATATGGATGCTTGCTAAGGCTCATTTTTCCGCCAATGATGCAGGGGCTCACCAACTTGCACATCATTGGTTACGCA CACATGCTTGCATGGAACCTTTCATATTGGCAGCACATAGGCAATTAAGTGCTATGCATCCAATTTATAAGTTATTGGATCCACACATGAGGTACACGTT GGAGATCAATGCTTTAGCTCGACAGAGCTTGATCAGTGTAGACGGAGTCGTTGAGTCGTGCTTCACTGTTGGCCGCTGTTGCATGGAGCTTAGTTCCAGT GTTTACAAAAGTGCTTGGCGCTTTGACATGGATGCTCTTCCTGCAGATCTCGTCCGCAGGGGAATGGCAGTACCTGATTCAACCCAACCACATGGTTTAA AGCTACTAATAGAGGATTACCCTTATGCTGCTGATGGGTTACTCATATGGTCTGCAATTGAAAACTGGGTTCGTAAATATGTAAATCATTATTACACAGA TTCAAGCATGGTAAGCGATGACAAAGAGTTACAAGGTTGGTACTCTGAGACTATCAATGTGGGTCATGCTGATCTTAAGGATGCAAGTTGGTGGCCAAAA TTAAACACCAATGGAGATCTTATTTATATTCTCACCACTTTCATTTGGAATGTTTCTGCATTCCATGCTGCACTTAATTTTGGGCAGTATCCTTATGGTG GATTCGTGCCGAATCGTCCACCATTGATGAGAAGATTGATTCCTGAAGAGAGTGACCCAGAATATGCTAACTTAATAGCAGATCCACAGAAGTTTTTCCT TCACTCATTACCTAGTGTATTGCAGGCTTCAAAATATATGGCTGTGGTTGATACATTGTCTACTCATTCACCTGATGAGGAATACTTGGGCGAGAGGCAA CAACAATCTACTTGGTCAGATGAGCCTGAGATTGTTGAAGCATTCTATGAGTTCTCGGCCGAGATTGGGAGGATCGAGAAGGTGATCGATGGTCGAAACC GTGATACGAATTTAAAGAATCGTTGTGGTGCTGGGGTGTTGCCTTATGAATTACTTGCTCCAAGTTCTGATAGTGGTGTTACTTGCAGAGGTGTTCCAAA TAGTGTATCCACTTAATATTGTAAAAATAAATAATAGAATCACATCTCATATTATCGAGAGTGTTTGGATTTTGGAATAAATGACAATAATAATTAATGT CAGTAGGTATTGTCATATTGTTAATATAAGGGTGTAAAAACTATATATCTATTAAAAGTGTCATTTTTTTATACATTTCTTTTAGGATTTGTGAATTTTC CTCGTACTCAGAAAACTTAATGTTATAAGAGTAAGGTGAAAGATTAATAAAAACGGATATACGAACTTACAGGCTGAGATCAAGGCATATCGCAATTAAT CTTTCTTATTTTAACTTGTAC
• Tissue: pods
• Gene name: LI_gene_151779;
• Additional information: details;

Expression of Ll_transcript_501112

FPKM

• PAB: 0.2
• PNAB: 0.5
• PS1: 0.7
• PS2: 0.3
• PS3: 0.9
• PW1: 33.8
• PW2: 2.9
• PW3: 0.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_501112

• Blastp: Linoleate 13S-lipoxygenase 3-1, chloroplastic from Solanum with 70.42% of identity
• Blastx: Linoleate 13S-lipoxygenase 3-1, chloroplastic from Solanum with 74.22% of identity
• Eggnog: Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding (By similarity)(ENOG410YN4N)
• Kegg: Link to kegg annotations (102597498)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019433919.1)
• Pfam: PLAT/LH2 domain (PF01477.22)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;