Ll_transcript_501115

• Id Trinity: TRINITY_DN47339_c5_g3_i1
• Name Transcript: Ll_transcript_501115
• Sequence: ATCTAAGCATAATGGTTGCAAATCTAGATATATCCTTCATGGTAGATTTACCTGATTGTTTTTATTTCCTAAATTATGAAGGTTGAGGACTCATGCATGC ATGGAACCATTTATATTGTCAGCACATAGACAATTAAGTGCAATGCATCCAATTTTCAAGTTGTTGGATCCACACATGAGGTACAACTTGGATATCAATT CTATAGCTCGCCAAAGACTCATCAATGCTGGTGGAATCATTGAGTCAAGCTTCACTCCTGGCCGCTATTGCATGGAGATTAGTTCTGCTGCTTACAAAAA CTCGTGGCGCTTTGACAAGGAAGGCCTCCCTGCTGATCTCATACACAGGGGAATAGCTGTACCTGACTCAACACAACCAAATGGTCTAAAGCTTCTCATA GAAGACTACCCATATGCAAAAGATGGGCTTTTAATCTGGTCAGCAATTGAGAACTGGGTCCGCACCTATGTGAACCACTACTACCATCATCCAAGCATGA TTTGCAATGATAAAGAGTTACAAAGATGGTACTCCGAGTCGATCAATGTGGGTCACGCAGATCTCAGACACGAGACCTGGTGGCCCACATTGAACAATGG TGAGGATCTTGTCAATATCCTCACCACATTGATTTGGATATCATCAGCACAACATGCAGCTCTTAACTTTGGACAGTACCCTTATGGAGGTTATGTACCA AATCGTCCACCATTAATGAGAAGACTAATCCCACAAGAAGGTGATCCAGAATATGCAAATTTCCTAGATGACCCACAAAAGTATTTCCTAAATGCATTGC CTAGTTTGCTACAAGCTACAAAATATATGGCTGTGGTTGACACATTATCTACTCACTCACCAGATGAAGAGTACTTGGGAGAAAGGAATCAGCCATCTAT TTGGTCAGGTGATGCACAAATCATTGATGCATTCTATCAATTCTCGGCAGAGATTGGAAGAATAGAGAAAGAGATTGAGAAAAGAAACCATGATGCAACA CTAAGGAACCGATGTGGCGCAGGAGTAATACCTTATGAGTTACTTGCACCTAGCTCTGGACCTGGTGTTACATGTAGAGGAATTCCTAATAGTGTCTCCA CATAAAAGTGCCCCAAAAATAAGTGCCACTACAACCAAATAGCAACATTAAGAGAAACTATTGCATGATTAGGATTGCATGGCCCGGGATCAAATAGTCT TGGCCAATAACATGGCGCTTCTAGGCAGTTAGACCATATTTGTCACCACCATGTGATTCCGACCCTGCAATAAGTTCTCATAGTTTTGAGAGGCATTATG GTTGCCTTACTAGTTACTTTATAGCATGGTCTAGAATACAAGACAATGCTCAGTTTGTACCTACATAAGATTAATTAGGTATCCTAGGGTTGTATAGGCT GTATATCAAATAGAGTTCAAGAATATTTGTTGTGTAACTATTTATACAATCAATGATACTATTATATTTATTTCCTCC
• Tissue: pods
• Gene name: LI_gene_151780;
• Additional information: details;

Expression of Ll_transcript_501115

FPKM

• PAB: 0.4
• PNAB: 0.1
• PS1: 0.6
• PS2: 0
• PS3: 0.1
• PW1: 2.3
• PW2: 0
• PW3: 0.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_501115

• Blastp: Linoleate 13S-lipoxygenase 3-1, chloroplastic from Solanum with 79.88% of identity
• Blastx: Linoleate 13S-lipoxygenase 3-1, chloroplastic from Solanum with 79.82% of identity
• Eggnog: Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding (By similarity)(ENOG410YN4N)
• Kegg: Link to kegg annotations (102597498)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019423369.1)
• Pfam: Lipoxygenase (PF00305.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;