Ll_transcript_502200

• Id Trinity: TRINITY_DN47341_c0_g3_i4
• Name Transcript: Ll_transcript_502200
• Sequence: GAAAAATATTTATTATAAAAAAACTGAAATCGGTTTTGTAACCATTGATGGTTTCAATGCAATAATAATAATATAAAATAAATAATAACCACTTCTCCAT TTTCTGGAACACCCACCTCTTCATCTTTTCTATTCTATTCACCAATTTATCTATCATTCATCTTCCCCTCTCCCTAACCTTTCTTTGCAGATCTATATCT TCCTCTCATATTCTATTTCACCCATTTTTTGTTCTATGTTATTTTTGGATTGTCTTTCATATTCATGTTTTCTGGCTCAACTTTTTACCGTTAGAAAGCA TTATATTCTCAAGATTGAATCTCAAAGGTCGTGAATATCAAGATATTTATTGGCTACTCTAGTCATTACATAATTTGAGTTAGTCAAGTGCATTTTCTTG GACAATGTTGGGTGGCAACAATGGCAATCCTGTGCTTCCTGTTTTCCTTGATGAGACTCAATTTCGGTATCAAAATAGTACAGCAAATCAGTTGCAGCTG TTTGGGAATTTACAAGCTGGATGTGGCGTTGATCCAATTAATTACTTCGGAAATGAGCATATTAATTCCATGAGTCAGCCTACTAAACGAAGCAGCGAAA TGGAAAATATCTCAAAGCATCAAAAGCTTCAGATTTCCTTAAATTACAACATCTGTCAAGATGATGCTAATCGATCAGGAATCATTCCAAACCGTAACCC TGTGTCAACTGGATTGAGGCTTTCATATGATGACGATGAGCACAACTCATCTGTCACGTCCAGTGGCAGTATCAGTGCCACACCTTCAATCATGTTGTCC CTTGGTGACAATATCCGAGCTGAGCTTGATAGGCAGCAAGATGAGTTGGACCAGTATATTAAACTTCAGGTATACATTATAGCTGCTCTCTTCTTTCAAT TCATGATGTTGGTTATGGGATATCTTCTGGGTGCCAATGATCTATGCTTAATATATTTCTATTCTTTAGAAAGGTATGCATGCTAGCTTGTGGCCTTGGC TTAATCCAATAGGAAAAGGGGAAAAAATATATGCATACTCTTCAAATTGTCGAGTCATAGTTTTGTATTTGGGGCCTGTGCTCGAAAGTTCTGAATTGAT TTTTGTTTTATCTATTACACAATAATACTTTGAACTTAAAGTGGCACTCTGATAATGGAGTTATCAACTGGACATGATTGTAGTTCTGTGATTTTATTTT AATTCCTTTCTACACAGAAGGAACAATTGTCAAAAGGTGTAAGAGACATAAAGCAAAAACACATGGCCACTCTCCTTACATCCATTGAGAAAGGTGTCTG TAAGAAGCTAAGGGAAAAAGATGTGGAGATAGAGAACATGAACCGGAAGAACAGGGAGCTAGCAGAGAGAATAAAACAGGTGGCTATTGAAGCACAAAAC TGGCACTACAAAGCAAAGTATAACGAGTCAGTTGTCAATGTGCTAAGGAACAATCTCCAGCTTGCCATTTCACAAGGAGTCGAACAAGGGAAGGAAGGGT TTGGGGATAGCGAAGATGATGACGCCGCATCATACATAGATCCCAATAACTTCCTGAGCATCCCGGCCGTGCCTATGAAGTCTACTTACAAGAGCTGCCA AGGCATGGAGAATATGAGTTGCAGGGCATGCCAGGCAAAGGAGGTATCTATGTTGTTAATGCCTTGTAGGCACCTGTGCTTGTGTAAGGACTGTGATGGG TTTGTGAATGTTTGCCCTGTATGCCAATTGATAAAAACCGGAAGTGTTGAGGTCCATATGTCTTAACCTACAAAGGGTAGGTATTAAAAATGGAAAATAT GTCACTTTTCTTGTGTGATTTTACTACAAGTAAAAATATTTGAGACTCATGTACCAAGAGAAAGTACTTATCACTAAAAGTTGATTACTTCCAAGTATTT CTATCTAAATTTTCTTGTGTTATCTTCTTCCTCCTCGCCCTCTTATTTTATGTAATGTTTTTCATTAAGATTTAACTTACTACTTATGTGATGCATACAT TATTGTGATCGGGAG
• Tissue: pods
• Gene name: LI_gene_151803;
• Additional information: details;

Expression of Ll_transcript_502200

FPKM

• PAB: 7.5
• PNAB: 7.5
• PS1: 11.6
• PS2: 10.5
• PS3: 10
• PW1: 5.3
• PW2: 7.2
• PW3: 8.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_502200

• Blastp: Probable BOI-related E3 ubiquitin-protein ligase 3 from Arabidopsis with 36.47% of identity
• Blastx: Probable BOI-related E3 ubiquitin-protein ligase 3 from Arabidopsis with 33.16% of identity
• Eggnog: protein binding zinc ion binding(ENOG4111S1X)
• Kegg: Link to kegg annotations (AT3G12920)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019445443.1)
• Pfam: Zinc finger, C3HC4 type (RING finger) (PF13920.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;