Ll_transcript_500210

• Id Trinity: TRINITY_DN47344_c1_g2_i2
• Name Transcript: Ll_transcript_500210
• Sequence: ATAATATATAACCCTTTCATCTATATATTCTTCAGCGTACTCAAAACCTTTATTTATAATATAAAGTTATAATATACAAGTCATAACCAAATACCCTTTT CATAATATATACTTTTCATTATATATACTTTCATATTCCTAGCTACCACCATCACATATATACTTTGGTCTTTCATAACATGGGTGTGGTGTGTAATTGG GAGAGCAAGGTGGCGGCGGCCGCCGAGGCGTTTCGACAGAAGACGATGGCGACCGCAGCCGGCATGCAAAGGAGGAAGGAGGATGAGGGGCAAAAGATGA ATAACTTATTTGGTTATGATGATGAAGGGGACAACCTTGTATGTGTTACTAGTGGTGTCTCATATTTGGGACATGCTTTGGTGAATCAACTTTTGTTAAG GGGTTATTCTGTTAGAATCATAGTTGATAATCAAGAAGAGATAGAGAAAGTGAAAGAAATTGAGAGAAGAAGAAAAAGCAATATAGAAGTAATAATGGTA AAGCTAAGTGATAATAATGTTCATAATTTGGAGAAAGCATTCCAAGGTTGTCATGCTCTTTTTCATACCTCTTCCTTTACTGACCCTGCTGGCCTCTCTG GTTACACTGTGAGTCTCTCTTTTTTTTCAATATCTTACTTTACATGTTTATGATTACGGAATAATGTATCTCCTCCGGCCAGTAAAAGTATGATATATGT ACTATTATTTTTAGTTTTGGAAATGTTTTATAGAAGATAATGAAACATGAGAGATCGGGAGACATTTTATTATCTTATGATTATGTTAATAAAGTATAAT AATCTTTAAATTTATACTTGTTATATAAGTCTAGCATCTTTAATCTCTTCTTATTAGGTTCTATTTTGATGTTGAAGGTACAAGAATTAAACATGGACTA AGTAACCTTTAAAATTTTAAAAGTGGTATCTCTGAACGGACAAGGATATGCTGTCCCAAAGCCTGTACCAAACCAATAACAACATGTCATATCAGTCAAA AAAAATTAAACATTCATATTTTTATTTATTTTTTCTTCATTCTGATTGGCTTGGTACATGACTGTGGACATGCTTTGGGATACTTGATCCCCATCTATCT CTAACCACATAAACATTTCAAGATTATAGGTTCTCACATATACAACTTATAAAGAAATAATAATAAAATATCTTATTCCAAATCCAATTCATTAAGTTTA AAATAATTTTTTAAGAAGTTCGAGATTGATTCGTTTATAAGCTCCACGGTATAATATATTTAGTACAAATTACAATTGATCTTCCATGTATTTAGTACCC TAAAGTGTACCCCTCATTAATGGCTCTTATACTCTCTTTGTACTATTATTCATCATTGTCTTGCACAATAACACATAGTTGGGCCATACCTTGGAAAGTA AGATCTCATCACATGTATTTGCAGGATCCTCTCTTTAATTGGACCCACATCATCATTTTGTACATCTTATACTAAAAATGTAATTAATAAACCCAAACTT AAACATATAAATTTTAGATAATAATTAAGGGAACTATAAGGAAAAACCTATCATTGTAATCAAAACACCAAATTTTATCAAAGGTCTCAGATTCGAGTCT TATGGATTAAAACAATGTCTGCTGCGAGTGCTAGTCTCACATAGTTGTGGACATTCTCGGCCCAGACAGTATTACCTCCAGTACAAGAATATATAGAAAC AAAAAACACTAAAATTTCAATATCAACTTAAACATAAAAAAACAACCCAAGTAATAATTGTTTCCCTTAAAAATGTTCACATTTGAAACTTCTTGTTCCA TTCTAGTTTTATTAATACATAAACTAGAGCTTTTATTCTACCATGTTCTAATATGTTGATAAAGCACTATTTTAAATTGTAAAAAAGTAAAGTTAGAATA TAATATATGCAATAACTTGGTTCTATTTGTAATATAGAAATCAATGGCTGAAATTGAAGTGAGAGTGAGTGAGAATGTAATAGAAGCATGTACAAGAACA CCTTCCATAAAAAAATGTGTGTTCACATCATCACTATCAGCTTGTATATGGCAAGAGATTTCACAATCAAACCTCAACAATGTTATCAATCATAGCTCAT GGAGCAATGAGTCATTCTGCATAGACAATAAGGTAAATTTCTACAACAATTGCACCATTTTTATTTGAGTGAAGTATTAGATAATTCAATTGTGATGAGT TAGTATGTCGAAAATTTTTTACATTGTGTAAAAATGGATGAGTTAAAAAACATATAAGTGAATGATATTAAACTCACTTATATGTTTCTATT
• Tissue: pods
• Gene name: LI_gene_151821;
• Additional information: details;

Expression of Ll_transcript_500210

FPKM

• PAB: 0.7
• PNAB: 0.3
• PS1: 0.3
• PS2: 0.1
• PS3: 0
• PW1: 0.3
• PW2: 0.6
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_500210

• Blastp: Cinnamoyl-CoA reductase-like SNL6 from Oryza sativa with 40.21% of identity
• Blastx: Cinnamoyl-CoA reductase-like SNL6 from Oryza sativa with 50% of identity
• Eggnog: Nad-dependent epimerase dehydratase(COG0451)
• Kegg: Link to kegg annotations (4326581)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019442559.1)
• Pfam: 3-beta hydroxysteroid dehydrogenase/isomerase family (PF01073.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;