Ll_transcript_500231

• Id Trinity: TRINITY_DN47344_c3_g1_i10
• Name Transcript: Ll_transcript_500231
• Sequence: ACTACTGGATGAAATGATAATGTTAATAGGCTTAAATATAGTAATTGTTATTGTTAAGAGGATGACTATTGATGGTTTCATCCTTGTATGAAAAAACTTT TGCAACACACTCAGTGAATCTTTTGGCGGTCTATTAGATGTTACACTTTCTTTCCTTCTTAGAGTGATGAGAAATGAAAGGTGTGTTGCCTTAAAAGGTA GTTGGCACTAGCTGTCTAGTGAGAGCATGTTAGTATATGATGGTTCATATTACACACATATCTTGAAGTGAGTGCATTGTTAGTTGTTAGTGTTGGAGGA AATTGGTGAATTAATGAAAATGTGGGAAAGGACACTTTGATGTCGGGTCTAAGAGGGGATTGGGATCACCTGTCCCAAAGTATGTCCTCAATCATGTACC AAGCCAATCAGAATGAAGAAAAAATAAATGAAAATATAAATGTTTAATTTTTTTGACTGATGTGGCATGTTGTTATTGGTTTAGTACAGGCTTTGAGACA GAATTTGGGACAACAGATCTTGGTTCTCTAACAGGATATAATACACAGTATACACTGTCTATTTCATTAATTCCGTTGAAGGCATGCCACTTATTTATTA TTGGTCCCCCACACAAGTGAAATCTTGATAAGTTTTGCAATTATTGCTTCGGCTCAAAATCAATGCATCTTCGCTTCAACCTGATTACTTGTTGCATTTT ATCATCTCCTTGACAAAGTGACAATCTTTTGTTTTGGGCTGAGAGCCCAAAAAGCAGAGTTACACTTACACCCCTGATAGGTATATCTGAAAACGTTCTT CATCACAACGCGGTTCCTCTCTCCCCTCTTCCACCACCACCACCAACAACAACAACAACAACAATCCGTTGTTTACGTTGATGGGTATGCCAAGGTTTGG GCGTGCAAAGAATAATGGTGAATCAAGTTCAAACATTTATGTAGCGAATTGTGGGCCAGGTGTGGGAATTTCTCATGACGATATTGCATCTGTTTTCTCC AAATTTGGAGACATAAATGGAGTTTATGCTGCTGATGACACTGGCACACGTGTCATCGTTTCGTATTCTCATCACTCTTCTGCTCAATCTGCACTCATGG CTTTAGATGGACACACGTGTCCTCAACTTGGTGGTAGATCCTTGCATATTCGTTATTCTGTCCAAAACTCTATTCCCAAGGATAAAATGAGTGACTCGGT TCCTGTATCTATCACAGCATCAGATCTTGGCATTTCAGGCATTTACCTAGTTCATGACTTCATTAGCGCCGAGGAAGAAGAGGTATTGCTTCAAGCTGTT GACTGCAGGCCCTGGAACTGTCTTTCAAAAAGAAGGGTTCAACACTATGGTTACGAGTTTTGTTATGATACTAGGAATGTTAATACAAGGCATTGTTTAG GTGAACTTCCGTCATTTGTTTCTCCATTACTTGAAAGAATCTCATCATGTCCAACTTTCAAGAATGTTGAAAATATAGTCCTGGACCAAGTAACGGTAAA TGAGTACCCATCAGGAGTGGGGTTGTCCCCCCATATAGACACCCATTCTGCATTTGAAGATTTAATTTTCAGCCTTTCATTATCAGGACCTTGTATAATG GAGTTCAGAAGATATGAAAGTGGTGATCGGCTTCCTAAAATTGCCTCAAGTGCTGTTGCAAAAACAGAAGGTCCAGAAGATGATTCAAATTTTATTAGGA AGGCTATTTATCTCCCCCCTCGATCATTGCTACTCATGTCTGGAGAAGCACGTTATGCTTGGCACCATTACATTCCACACCACAAGATTGACAAAGTGAA TGACAAAGTCATCAGAAGGGCATCGAGAAGGGTATCTTTTACATTGCGTAAGGTGAGAACAGATGCATGCAAATGTGCGTTCCCACAGTACTGCGACTCT CAAAGATAAGATTTCACTGAGGAGGCAAGGAAACAATTTTAAATATAACCCATCAAGTATCTATACTGAGAATTGCAATGATTATGGATGGTTTATATCC TCTGCAGTCAACCAAATAACCCACTGTTTCTCTGCATCATCTTTGGGTTCTGTATTTCCATGAGCACCTGCAATGACTTTTTAATCCTATCATTTTTAAG TTGTAGCCTCATGTGGCTCCACAGCTAAGAATATATTAGCTCTTGAGTGAGGATCAGGTTTTGATTTTAGCTTATTGAGTTTGCATATTGAACTTTGAGG TCAATTTGTACTTGTATATGCTCTTGCATTTATTCAATTGATATGGCACATTATACAAACTTAATTTGCAGTAACAAAGAAACGAACATAAATGCATGTC TACTAGAACCCCAACAGTAACATTTTGTTGCAATTAAAAAAA
• Tissue: pods
• Gene name: LI_gene_151825;
• Additional information: details;

Expression of Ll_transcript_500231

FPKM

• PAB: 2.2
• PNAB: 3.3
• PS1: 3.5
• PS2: 2.7
• PS3: 4.3
• PW1: 3.5
• PW2: 2.3
• PW3: 2.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_500231

• Blastp: Alkylated DNA repair protein alkB homolog 8 from Silurana with 32.1% of identity
• Blastx: Alkylated DNA repair protein alkB homolog 8 from Silurana with 32.1% of identity
• Eggnog: Methyltransferase(COG0500)
• Kegg: Link to kegg annotations (550051)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019445183.1)
• Pfam: 2OG-Fe(II) oxygenase superfamily (PF13532.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;