Ll_transcript_500235

• Id Trinity: TRINITY_DN47344_c3_g1_i12
• Name Transcript: Ll_transcript_500235
• Sequence: ACTACTGGATGAAATGATAATGTTAATAGGCTTAAATATAGTAATTGTTATTGTTAAGAGGATGACTATTGATGGTTTCATCCTTGTATGAAAAAACTTT TGCAACACACTCAGTGAATCTTTTGGCGGTCTATTAGATGTTACACTTTCTTTCCTTCTTAGAGTGATGAGAAATGAAAGGTGTGTTGCCTTAAAAGGTA GTTGGCACTAGCTGTCTAGTGAGAGCATGTTAGTATATGATGGTTCATATTACACACATATCTTGAAGTGAGTGCATTGTTAGTTGTTAGTGTTGGAGGA AATTGGTGAATTAATGAAAATGTGGGAAAGGACACTTTGATGTCGGGTCTAAGAGGGGATTGGGATCACCTGTCCCAAAGTATGTCCTCAATCATGTACC AAGCCAATCAGAATGAAGAAAAAATAAATGAAAATATAAATGTTTAATTTTTTTGACTGATGTGGCATGTTGTTATTGGTTTAGTACAGGCTTTGAGACA GAATTTGGGACAACAGATCTTGGTTCTCTAACAGGATATAATACACAGTATACACTGTCTATTTCATTAATTCCGTTGAAGGCATGCCACTTATTTATTA TTGGTCCCCCACACAAGTGAAATCTTGATAAGTTTTGCAATTATTGCTTCGGCTCAAAATCAATGCATCTTCGCTTCAACCTGATTACTTGTTGCATTTT ATCATCTCCTTGACAAAGTGACAATCTTTTGTTTTGGGCTGAGAGGTCAGGTTTTCTTGTTACTTACTAAAAGCATAATAACTCCGTGAGGTATCAGTTT CATGTTTTTTAGTTGTTTGGGAATGGCTTCAAAGTTTAAACTTTTAAAAGAATGAATTATAACCAAAAAGAGAGAGAATGAATTACATGGATATGTGTAA CAAACTATCCCCATCTATATGAAAGTTACTACTTCTAAACATAAACTAACATAATTCTCGTCTTACATACGGTTCATTGCTATTTCTATTTGAACATTTT TTTAGTAAAGCTAGCTTCAGCATAAATATTTTTGCACGGACAAGATTATCTCTTATGAAAAATACATGTAACTAAAAAATAAAAACATTGTCTATTATTT ACCGGAAAACTTGTCTATATATCTCCACATATTAATTCATAAATATAATGGTGATCCTTGATGCTTACAAAATATATTTTAGAGGTGTTACTTCATGTAT GTATATTATTTTTTTAGTAGACTACCACTTTTATATTTGCTTTTGTATGCATCTTTTACCAAATTACAAAAAATGTATGATATCAACAAGTTAAATTCAT ATCAGCCCAACAGATTATGTTGTTATGCACTTTTTCCTATGCATAGAATGGATTTTAGTAGGTTGTTTGCATATTCTGGGCTTTAATATGTGATGGGTTT GTGCAGCCCAAAAAGCAGAGTTACACTTACACCCCTGATAGGTATATCTGAAAACGTTCTTCATCACAACGCGGTTCCTCTCTCCCCTCTTCCACCACCA CCACCAACAACAACAACAACAACAATCCGTTGTTTACGTTGATGGGTATGCCAAGGTTTGGGCGTGCAAAGAATAATGGTGAATCAAGTTCAAACATTTA TGTAGCGAATTGTGGGCCAGGTGTGGGAATTTCTCATGACGATATTGCATCTGTTTTCTCCAAATTTGGAGACATAAATGGAGTTTATGCTGCTGATGAC ACTGGCACACGTGTCATCGTTTCGTATTCTCATCACTCTTCTGCTCAATCTGCACTCATGGCTTTAGATGGACACACGTGTCCTCAACTTGGTGGTAGAT CCTTGCATATTCGTTATTCTGTCCAAAACTCTATTCCCAAGCATCAGATCTTGGCATTTCAGGCATTTACCTAGTTCATGACTTCATTAGCGCCGAGGAA GAAGAGGTATTGCTTCAAGCTGTTGACTGCAGGCCCTGGAACTGTCTTTCAAAAAGAAGGGTTCAACACTATGGTTACGAGTTTTGTTATGATACTAGGA ATGTTAATACAAGGCATTGTTTAGGTGAACTTCCGTCATTTGTTTCTCCATTACTTGAAAGAATCTCATCATGTCCAACTTTCAAGAATGTTGAAAATAT AGTCCTGGACCAAGTAACGGTAAATGAGTACCCATCAGGAGTGGGGTTGTCCCCCCATATAGACACCCATTCTGCATTTGAAGATTTAATTTTCAGCCTT TCATTATCAGGACCTTGTATAATGGAGTTCAGAAGATATGAAAGTGGTGATCGGCTTCCTAAAATTGCCTCAAGTGCTGTTGCAAAAACAGAAGGTCCAG AAGATGATTCAAATTTTATTAGGAAGGCTATTTATCTCCCCCCTCGATCATTGCTACTCATGTCTGGAGAAGCACGTTATGCTTGGCACCATTACATTCC ACACCACAAGATTGACAAAGTGAATGACAAAGTCATCAGAAGGGCATCGAGAAGGGTATCTTTTACATTGCGTAAGGTGAGAACAGATGCATGCAAATGT GCGTTCCCACAGTACTGCGACTCTCAAAGATAAGATTTCACTGAGGAGGCAAGGAAACAATTTTAAATATAACCCATCAAGTATCTATACTGAGAATTGC AATGATTATGGATGGTTTATATCCTCTGCAGTCAACCAAATAACCCACTGTTTCTCTGCATCATCTTTGGGTTCTGTATTTCCATGAGCACCTGCAATGA CTTTTTAATCCTATCATTTTTAAGTTGTAGCCTCATGTGGCTCCACAGCTAAGAATATATTAGCTCTTGAGTGAGGATCAGGTTTTGATTTTAGCTTATT GAGTTTGCATATTGAACTTTGAGGTCAATTTGTACTTGTATATGCTCTTGCATTTATTCAATTGATATGGCACATTATACAAACTTAATTTGCAGTAACA AAGAAACGAACATAAATGCATGTCTACTAGAACCCCAACAGTAACATTTTGTTGCAATTAAAAAAA
• Tissue: pods
• Gene name: LI_gene_151825;
• Additional information: details;

Expression of Ll_transcript_500235

FPKM

• PAB: 0.8
• PNAB: 0
• PS1: 0.5
• PS2: 0.4
• PS3: 0.2
• PW1: 0.3
• PW2: 0
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_500235

• Blastp: -
• Blastx: Alkylated DNA repair protein alkB homolog 8 from Silurana with 36.99% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019445183.1)
• Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF00076.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;