Ll_transcript_500246

• Id Trinity: TRINITY_DN47344_c3_g1_i20
• Name Transcript: Ll_transcript_500246
• Sequence: ACTACTGGATGAAATGATAATGTTAATAGGCTTAAATATAGTAATTGTTATTGTTAAGAGGATGACTATTGATGGTTTCATCCTTGTATGAAAAAACTTT TGCAACACACTCAGTGAATCTTTTGGCGGTCTATTAGATGTTACACTTTCTTTCCTTCTTAGAGTGATGAGAAATGAAAGGTGTGTTGCCTTAAAAGGTA GTTGGCACTAGCTGTCTAGTGAGAGCATGTTAGTATATGATGGTTCATATTACACACATATCTTGAAGTGAGTGCATTGTTAGTTGTTAGTGTTGGAGGA AATTGGTGAATTAATGAAAATGTGGGAAAGGACACTTTGATGTCGGGTCTAAGAGGGGATTGGGATCACCTGTCCCAAAGTATGTCCTCAATCATGTACC AAGCCAATCAGAATGAAGAAAAAATAAATGAAAATATAAATGTTTAATTTTTTTGACTGATGTGGCATGTTGTTATTGGTTTAGTACAGGCTTTGAGACA GAATTTGGGACAACAGATCTTGGTTCTCTAACAGGATATAATACACAGTATACACTGTCTATTTCATTAATTCCGTTGAAGGCATGCCACTTATTTATTA TTGGTCCCCCACACAAGTGAAATCTTGATAAGTTTTGCAATTATTGCTTCGGCTCAAAATCAATGCATCTTCGCTTCAACCTGATTACTTGTTGCATTTT ATCATCTCCTTGACAAAGTGACAATCTTTTGTTTTGGGCTGAGAGGTCAGGTTTTCTTGTTACTTACTAAAAGCATAATAACTCCGTGAGGTATCAGTTT CATGTTTTTTAGTTGTTTGGGAATGGCTTCAAAGTTTAAACTTTTAAAAGAATGAATTATAACCAAAAAGAGAGAGAATGAATTACATGGATATGTGTAA CAAACTATCCCCATCTATATGAAAGTTACTACTTCTAAACATAAACTAACATAATTCTCGTCTTACATACGGTTCATTGCTATTTCTATTTGAACATTTT TTTAGTAAAGCTAGCTTCAGCATAAATATTTTTGCACGGACAAGATTATCTCTTATGAAAAATACATGTAACTAAAAAATAAAAACATTGTCTATTATTT ACCGGAAAACTTGTCTATATATCTCCACATATTAATTCATAAATATAATGGTGATCCTTGATGCTTACAAAATATATTTTAGAGGTGTTACTTCATGTAT GTATATTATTTTTTTAGTAGACTACCACTTTTATATTTGCTTTTGTATGCATCTTTTACCAAATTACAAAAAATGTATGATATCAACAAGTTAAATTCAT ATCAGCCCAACAGATTATGTTGTTATGCACTTTTTCCTATGCATAGAATGGATTTTAGTAGGTTGTTTGCATATTCTGGGCTTTAATATGTGATGGGTTT GTGCAGCCCAAAAAGCAGAGTTACACTTACACCCCTGATAGGTATATCTGAAAACGTTCTTCATCACAACGCGGTTCCTCTCTCCCCTCTTCCACCACCA CCACCAACAACAACAACAACAACAATCCGTTGTTTACGTTGATGGGTATGCCAAGGTTTGGGCGTGCAAAGAATAATGGTGAATCAAGTTCAAACATTTA TGTAGCGAATTGTGGGCCAGGTGTGGGAATTTCTCATGACGATATTGCATCTGTTTTCTCCAAATTTGGAGACATAAATGGAGTTTATGCTGCTGATGAC ACTGGCACACGTGTCATCGTTTCGTATTCTCATCACTCTTCTGCTCAATCTGCACTCATGGCTTTAGATGGACACACGTGTCCTCAACTTGGTGGTAGAT CCTTGCATATTCGTTATTCTGTCCAAAACTCTATTCCCAAGGATAAAATGAGTGACTCGGTTCCTGTATCTATCACAGCATCAGATCTTGGCATTTCAGG CATTTACCTAGTTCATGACTTCATTAGCGCCGAGGAAGAAGAGGTATTGCTTCAAGCTGTTGACTGCAGGCCCTGGAACTGTCTTTCAAAAAGAAGGGTT CAACACTATGGTTACGAGTTTTGTTATGATACTAGGAATGTTAATACAAGGCATTGTTTAGGTGAACTTCCGTCATTTGTTTCTCCATTACTTGAAAGAA TCTCATCATGTCCAACTTTCAAGAATGTTGAAAATATAGTCCTGGACCAAGTAACGGACCTTGTATAATGGAGTTCAGAAGATATGAAAGTGGTGATCGG CTTCCTAAAATTGCCTCAAGTGCTGTTGCAAAAACAGAAGGTCCAGAAGATGATTCAAATTTTATTAGGAAGGCTATTTATCTCCCCCCTCGATCATTGC TACTCATGTCTGGAGAAGCACGTTATGCTTGGCACCATTACATTCCACACCACAAGATTGACAAAGTGAATGACAAAGTCATCAGAAGGGCATCGAGAAG GGTATCTTTTACATTGCGTAAGGTGAGAACAGATGCATGCAAATGTGCGTTCCCACAGTACTGCGACTCTCAAAGATAAGATTTCACTGAGGAGGCAAGG AAACAATTTTAAATATAACCCATCAAGTATCTATACTGAGAATTGCAATGATTATGGATGGTTTATATCCTCTGCAGTCAACCAAATAACCCACTGTTTC TCTGCATCATCTTTGGGTTCTGTATTTCCATGAGCACCTGCAATGACTTTTTAATCCTATCATTTTTAAGTTGTAGCCTCATGTGGCTCCACAGCTAAGA ATATATTAGCTCTTGAGTGAGGATCAGGTTTTGATTTTAGCTTATTGAGTTTGCATATTGAACTTTGAGGTCAATTTGTACTTGTATATGCTCTTGCATT TATTCAATTGATATGGCACATTATACAAACTTAATTTGCAGTAACAAAGAAACGAACATAAATGCATGTCTACTAGAACCCCAACAGTAACATTTTGTTG CAATTAAAAAAA
• Tissue: pods
• Gene name: LI_gene_151825;
• Additional information: details;

Expression of Ll_transcript_500246

FPKM

• PAB: 0.8
• PNAB: 1.2
• PS1: 0.3
• PS2: 0.1
• PS3: 0.3
• PW1: 0.1
• PW2: 0.6
• PW3: 0.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_500246

• Blastp: Alkylated DNA repair protein alkB homolog 8 from Silurana with 28.18% of identity
• Blastx: Alkylated DNA repair protein alkB homolog 8 from Homo with 33.83% of identity
• Eggnog: Methyltransferase(COG0500)
• Kegg: Link to kegg annotations (550051)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019445183.1)
• Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF00076.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;