| Id Trinity | TRINITY_DN47344_c3_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_500223 |
| Sequence | ACTACTGGATGAAATGATAATGTTAATAGGCTTAAATATAGTAATTGTTATTGTTAAGAGGATGACTATTGATGGTTTCATCCTTGTATGAAAAAACTTT TGCAACACACTCAGTGAATCTTTTGGCGGTCTATTAGATGTTACACTTTCTTTCCTTCTTAGAGTGATGAGAAATGAAAGGTGTGTTGCCTTAAAAGGTA GTTGGCACTAGCTGTCTAGTGAGAGCATGTTAGTATATGATGGTTCATATTACACACATATCTTGAAGTGAGTGCATTGTTAGTTGTTAGTGTTGGAGGA AATTGGTGAATTAATGAAAATGTGGGAAAGGACACTTTGATGTCGGGTCTAAGAGGGGATTGGGATCACCTGTCCCAAAGTATGTCCTCAATCATGTACC AAGCCAATCAGAATGAAGAAAAAATAAATGAAAATATAAATGTTTAATTTTTTTGACTGATGTGGCATGTTGTTATTGGTTTAGTACAGGCTTTGAGACA GAATTTGGGACAACAGATCTTGGTTCTCTAACAGGATATAATACACAGTATACACTGTCTATTTCATTAATTCCGTTGAAGGCATGCCACTTATTTATTA TTGGTCCCCCACACAAGTGAAATCTTGATAAGTTTTGCAATTATTGCTTCGGCTCAAAATCAATGCATCTTCGCTTCAACCTGATTACTTGTTGCATTTT ATCATCTCCTTGACAAAGTGACAATCTTTTGTTTTGGGCTGAGAGGTCAGGTTTTCTTGTTACTTACTAAAAGCATAATAACTCCGTGAGGTATCAGTTT CATGTTTTTTAGTTGTTTGGGAATGGCTTCAAAGTTTAAACTTTTAAAAGAATGAATTATAACCAAAAAGAGAGAGAATGAATTACATGGATATGTGTAA CAAACTATCCCCATCTATATGAAAGTTACTACTTCTAAACATAAACTAACATAATTCTCGTCTTACATACGGTTCATTGCTATTTCTATTTGAACATTTT TTTAGTAAAGCTAGCTTCAGCATAAATATTTTTGCACGGACAAGATTATCTCTTATGAAAAATACATGTAACTAAAAAATAAAAACATTGTCTATTATTT ACCGGAAAACTTGTCTATATATCTCCACATATTAATTCATAAATATAATGGTGATCCTTGATGCTTACAAAATATATTTTAGAGGTGTTACTTCATGTAT GTATATTATTTTTTTAGTAGACTACCACTTTTATATTTGCTTTTGTATGCATCTTTTACCAAATTACAAAAAATGTATGATATCAACAAGTTAAATTCAT ATCAGCCCAACAGATTATGTTGTTATGCACTTTTTCCTATGCATAGAATGGATTTTAGTAGGTTGTTTGCATATTCTGGGCTTTAATATGTGATGGGTTT GTGCAGCCCAAAAAGCAGAGTTACACTTACACCCCTGATAGGTATATCTGAAAACGTTCTTCATCACAACGCGGTTCCTCTCTCCCCTCTTCCACCACCA CCACCAACAACAACAACAACAACAATCCGTTGTTTACGTTGATGGGTATGCCAAGGTTTGGGCGTGCAAAGAATAATGGTGAATCAAGTTCAAACATTTA TGTAGCGAATTGTGGGCCAGGTGTGGGAATTTCTCATGACGATATTGCATCTGTTTTCTCCAAATTTGGAGACATAAATGGAGTTTATGCTGCTGATGAC ACTGGCACACGTGTCATCGTTTCGTATTCTCATCACTCTTCTGCTCAATCTGCACTCATGGCTTTAGATGGACACACGTGTCCTCAACTTGGTGGTAGAT CCTTGCATATTCGTTATTCTGTCCAAAACTCTATTCCCAAGCATCAGATCTTGGCATTTCAGGCATTTACCTAGTTCATGACTTCATTAGCGCCGAGGAA GAAGAGGTATTGCTTCAAGCTGTTGACTGCAGGCCCTGGAACTGTCTTTCAAAAAGAAGGGTTCAACACTATGGTTACGAGTTTTGTTATGATACTAGGA ATGTTAATACAAGGCATTGTTTAGGTGAACTTCCGTCATTTGTTTCTCCATTACTTGAAAGAATCTCATCATGTCCAACTTTCAAGAATGTTGAAAATAT AGTCCTGGACCAAGTAACGGTATGCTAAAATGATGCTTTACTCCTTGAGTTATGGAACTAATAACAAGGCACGGTTGTTTTTATTTGTTGATTCAAAATA AAAAATATTTTGTTCTACATTAATACTTGAACACTGTGTGATAATTTTAGACGTAAGAATTGTTATTTATGTTTGATGTTCTAGTTTGAATGTTGCTAAA TATGTTTACAGGTAAATGAGTACCCATCAGGAGTGGGGTTGTCCCCCCATATAGACACCCATTCTGCATTTGAAGATTTAATTTTCAGCCTTTCATTATC AGGACCTTGTATAATGGAGTTCAGAAGATATGAAAGTGGTGATCGGCTTCCTAAAATTGCCTCAAGTGCTGTTGCAAAAACAGAAGGTCCAGAAGATGAT TCAAATTTTATTAGGAAGGCTATTTATCTCCCCCCTCGATCATTGCTACTCATGTCTGGAGAAGCACGTTATGCTTGGCACCATTACATTCCACACCACA AGATTGACAAAGTGAATGACAAAGTCATCAGAAGGGCATCGAGAAGGGTATCTTTTACATTGCGTAAGGTGAGAACAGATGCATGCAAATGTGCGTTCCC ACAGTACTGCGACTCTCAAAGATAAGATTTCACTGAGGAGGCAAGGAAACAATTTTAAATATAACCCATCAAGTATCTATACTGAGAATTGCAATGATTA TGGATGGTTTATATCCTCTGCAGTCAACCAAATAACCCACTGTTTCTCTGCATCATCTTTGGGTTCTGTATTTCCATGAGCACCTGCAATGACTTTTTAA TCCTATCATTTTTAAGTTGTAGCCTCATGTGGCTCCACAGCTAAGAATATATTAGCTCTTGAGTGAGGATCAGGTTTTGATTTTAGCTTATTGAGTTTGC ATATTGAACTTTGAGGTCAATTTGTACTTGTATATGCTCTTGCATTTATTCAATTGATATGGCACATTATACAAACTTAATTTGCAGTAACAAAGAAACG AACATAAATGCATGTCTACTAGAACCCCAACAGTAACATTTTGTTGCAATTAAAAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_151825; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_500223
| Blastp | - |
|---|---|
| Blastx | Alkylated DNA repair protein alkB homolog 8 from Silurana with 38.31% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_003534335.1) |
| Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF00076.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |