| Id Trinity | TRINITY_DN47345_c0_g1_i10 |
|---|---|
| Name Transcript | Ll_transcript_502302 |
| Sequence | AGTCTCTCTTCTTCTGACTCAGCTCATTCCTTCAACTTCCCAATTTATTCATATTATCAATTTTACTTCAATTCTCACTATATACTTATTTTAGGGTTTA TTTAAACCTCACCATGCTAAATTCTAGAGTCGCAAGATTTGGAGCTTGCGTCGCTAAACACCTTTCAAAAAGGACCTATGCTTCCATGTCTAGATCACCA TATATTTTAACCGCTACCAACCGTTGCCTACAACCTCCGCTTTCTTTTAATATGTTATACAATGGAGCCATGATTAAGAAGCATAGTTTCTTTTCAACGA TGACTACTAACAACACATCGGAGGAAGGGGGTGATAAAGAAGAAACGTAAGTTCTTTTTCTTTTGAGATGACAGTTTGTGGCAGTATTTTATTGTGTTCT AAATATGCAGCATTCGAAACAGGGTAATATTGTGTTTTAACTTTGGATGCAGAAAGCAGTGTTCATAATCTAGACCATTCCCCTATTGCTTTGTTACAAT TATCGGAATTTATGTGAAAAGTCATTGCATAGTATAAGACACCTTTGAAAAACTTGGCAATCTCTTCAGAGTTAATGTAATATTTTGACACACAGCAATG GTGAACTTTAATCATAAAAAAAGAATGGGCTCATTTTGCAGACAAATTTAAACTTCTGATATCTTGTCTTGGTGTGAGTTTTTGATTTTGTTCAAGGACT CTCCCGCATAATGAGCCTTTATCATAGAGCAAACTCAAGAATTTGACCCCAGAAAACAAGACTTTAGAAGGACAGACATTATGTAGTTGCATTTGTTTGT TAACTAAGATCTGGGGAATTAAATATTTTCTTAAAATTCTGCAATTTCCAGATTATACTTACATAATGGAGCTAACATATTGCATTGTTACACTTCCAAG TTTCATGATGATTGTGTTAATTGATGGGAGAATGGCATTATGATTGAATGTATCATCAATATCATGACTGGAGGTAATGTCTTGTAATTTTGGTTAATTA ATACTTAATAGTCTTAGAAAATAGAAAGCGGACACTATGGATATTGACTTGAAATTTGCACTTCTTTTCTTCCTTCCAATGGTTAATTTTCGAAGGCATT TCACAACTTGAAAATGCCAGGAATGATACTATCACATTGACACATGAACATTGAGGTTTAAACTTTAAGTTCGGATTACAGTTGCATCACTTGCATGTAT ATTGTGTGCATCTAAGCATTCATGATTTCATGCTATCAACCATGTTGGCATGATGTCTAAGCAGGAGTCAGGCTAATTCTAGAGTCTGACACTGTAATCT AAATGGAAAAATAACAATCTCTGAGCCTCAATTGTTTCACTGGGTTATAGTCCCTTGAACTCTTCCGATTTATCATTCAAGTCTCATGTCAGATTGCAGA CACCTAAAAACCTGCCTTAAGACAGATGGTGCTATTATTTCAAAGTGCCTCATGTGTGTGTGGCTGATTAGTTGACTAATTGAATGGTAGAATCGAGCAA CATCCTTGGTGAATTTCATCAGAGCACCTCAATTAAAGTTCAAAAGAAAAAAAATGCTCATTTGTCACTCTGCTCCTTATATGTTGATACAACTTTATGC AGGATATCTGTAACTTTCGTGGGCAAGGATGATGGGGAAACTCATATTAAAGTCCCTGTTGGTATGTCTATGTTAGAAGCTGCTCATGAAAACGACATCG AACTTGAAGGAGCATGTGAGGCCTCTCTTGCCTGTTCAACTTGCCATGTTATAGTGATGGATGTAGAATATTACAATAAATTGGAAGATCCAATTGATGA AGAAAATGACATGTTGGATCTAGCTTTCGGGCTTAGTGAAACATCACGTTTGGGTTGCCAAGTGATCGCCAAACCTGAACTTGATGGAATCCGTTTAGCT ATTCCTGGTGCCACTCTTCGCTGATGATGGTTATGTGCCCAAACCACACTAAAATGATCGGATACAAAGAAAACAGTTGTGTCCGTCTTATAGCTTCATA CCCAATTGGATAAATGGACATTTTTGATCTTAGGATTAGTTTTGTATTGTGTTGAATTTTTCATGGTTGCCGAGCTCCTCTGTATGAAAACCTGAGAGAT CACATTGAAATTCAGGCTGGCTGCAATTGCTTGCCTATATATTACTTGTCCTATATGATTTTGTTTATCAATCCTGAATAAATAAAAGAAGAAAATGAAA GAGGACCTAATCCCTTAATGCATTTTTGTCTAGCTAAGCTTTATGTGAAGATGAATTTTTTTATAAATGTTATAGTTTTTTATGCTATTAATGCATTATT CATTATTCTAATTTTTAATCTTTACACCCTTACACACCCAAACCATGACCACCATCGCTTCACTACAAGCTCCATTACCATCACCATTTAGTATATTATA TTACATTATTCCTAATGAAAAAATGAAATTAATTAAACAAATTCCAAAGGGTATATTTGGTAATTCATGATTGGTCCACGTAAGAAGGCAATCCCATCCA ACCAACCAAGTCACTTTGCTTCCTTATCTACCACTCCATCCAATTCATTCACTGTCTTTCTCCCTCTCTTCCATTCTCTCTCATGGCTTCCTTCACTGTC TCAAACCACTCTCTTCCCTCTTTCCGAATGCTTAACACTCAAACTCTCAACTACCCTTCTTCTCAAATCCTCCCCACACCTTCAAATTCTCATTTTTTTG GCCTCAAATTATCTAATTCTTCCACTTTCTCTATCCCATCTACTCCTGTTTCCTTTTCACAAAAACCTTCCATTTTTGCCAAGGTGAGTAAAGGTTCAAA GCCACCACCATTCACATTGAAAGATCAAGATGGAAAAACTGTGAGCCTCACCAACTTCAAAGGAAAACCTGTTGTTGTCTATTTCTACCCTGCTGATGAT TCTCCTAGCTGTACCAAACAGGCCTGCGCCTTTAGGGACTCGTATGAGAAGTTCAAGAAAGCAGGAGCAGAGGTTATAGGGATCAGTGGGGATGGTTCTT CATCTCACAAGGCATTTGCCAAGAAGCACAGACTTCCATTTACATTGTTGAGTGATGAGGGAGACAAGGTGAGGAAAGAGTGGGGAGTGCCGAGTGATTT ATTCGGAGCATTGCCCGGAAGAGAGACTTATGTTCTTGACAAAAATGGGGTGGTTCAGCTTGTCTACAACAATCAGTTCCAACCAGAAAAGCATATCGAC GAGACCTTGAAATTACTTCAAAGCCTTTGAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_151833; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_502302
| Blastp | Peroxiredoxin Q, chloroplastic from Sedum with 80.85% of identity |
|---|---|
| Blastx | Peroxiredoxin Q, chloroplastic from Sedum with 80.85% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019443533.1) |
| Pfam | Redoxin (PF08534.9) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |