Ll_transcript_501142

• Id Trinity: TRINITY_DN47349_c3_g1_i1
• Name Transcript: Ll_transcript_501142
• Sequence: ATCTATACCCAACATGCACTAAGAACACTTCTAAGATGATTTTTTTTGTTGGATTTTGATTCTTCTATTCAAAAAATGATTGTTCCAATAAGCAGTATCG CAGTTCAAATAGCAAGAGCACGTTAATTTGAATCATTCATCACTCTCTTACAACATAAACAAAGCAATTAGGGTTTTCTCTTCTCATTCAATCAATGGCT TCAGTGTACATACCAGTTCAAAATTCCGAGGAAGAGGTTAGGGTTTCTCTCGATCAACTTCCAAGGGATGCTTCCGATATCCTCGACATTCTCAAAGCTG AACAAGCCCCTCTCGATCTCTGGCTCATCATCGCGAGAGAGTACTTCAAGCAGGGGAAAGTTGATCAATTTCGCCAGATCTTGGAGGAAGGGTCCAGCCC TGAAATTGATGAATATTATGCTGATGTTAGATATGAGAGGATTGCTATCTTAAATGCCCTTGGGGCATACTATAGCTATCTTGGAAAAATAGAGACGAAA CAAAGGGAAAAGGAGGAACATTTCATTTTGGCCACACAATATTACAATAAAGCATCACGAATCGACATGCATGAGCCTTCCACTTGGGTTGGTAAAGGTC AGCTTTTGTTGGCAAAGGGTGAAGTGGAACAGGCATCAGCTGCATTTAAGATCGTGTTAGATGGAGATCGTGATAATGTTCCTGCTCTTCTGGGCCAGGC ATGTGTTGAGTTCAACCGTGGACGATATTCTGATTCACTTGAGTTGTATAAGAGGGCATTGCAAGTCTATCCAGATTGCCCTGCACCTGTGAGACTTGGC ATAGGTCTATGTCGCTACAAATTAGGTCAATTTGAAAAGGCTCAGCAGGCATTTGAGCGTGTTTTGCAGCTCGATCCAGAAAATGTCGAGGCTCTTGTTG CACTTGCAATAATGGACTTACGGACTAATGGAGCTGCTGGAATTAGGACAGGAATGGTTAAAATGCAGAGGGCATTTGAGATATACCCATACTGTGCAAT GGCTCTGAATTATCTTGCAAATCACTTTTTCTTTACTGGTCAACATTTTTTAGTAGAGCAACTGACTGAAACTGCATTAGCGGTTACCAATCATGGTCCA ACAAAGTCTCATTCTTATTATAATTTAGCACGCTCTTACCACAGCAAGGGGGACTATGACAAAGCTGGGGTGTTTTACATGGCATCTGTCAAGGAAGTCA ACAAGCCCCATGAATTTGTGTTTCCGTATTATGGTTTGGGACAAGTGCAATTAAAGTTGGGAGATTTTAGAAGTGCACTCTCAAACTTTGAAAAGGTTTT GGAGCTGTACCCGGATAATTGTGAGACATTGAAAGCACTTGGGCACATTTATGTTCACCTTGGTCAGACTGACAAGGGCCAGGAATTTATTAGGAAAGCT ACAAAAATTGATCCCCGTGATGCTCAGGCATTTCTTGAACTGGGAGAATTGTTAATCCTGTCTGACACAGGAGCTGCGCTAGATACATTCAAAACTGCTC GTACTCTTTTTAAGAAGGGAGGTCAAGCAGTACCAATTGAATTACTCAATAATATTGGTGTTCTTCAGTTTGAAAGGGGAGAGTTTGAGCTTGCTCAACA GACTTTTAAGGAGGCTCTGGGTGATGGGATATGGCTTTCTTTTACTAACAAGGAAAATAAGCCTTCTGTTGATGCTGCTACTTCTACTCTTCAATTCAAG GACATGCAGTTATTTCATGACCTTGAAAGGAATGGTCACCATGTGGAAGTACCTTGGGATAAAGTCACAGTACTCTTTAACCTGGCCAGATTACTTGAGC AATTAAATGAATCTGGAACTGCAAGCATTTTGTATCGCCTAATCTTGTTCAAGTACCCAGATTATGTTGATGCATATCTGAGGCTAGCTGCTATTGCAAA AGCTCGGAACAACATTCTCTTAAGCATTGAACTGGTTAATGATGCCCTGAAGGTAAATGACAAGTGTCCAAATGCACTATCTATGCTTGGGGAGTTGGAG TTAAAAAATGATGATTGGGTGAAGGCGAAAGAAACTCTCCGAGCAGCTAGTGATGCAACTGATGGGAAGGACTCATATGCAACTCTTTCTCTAGGAAACT GGAACTACTTTGCAGCAGTTCGCAATGAGAAGAGAAATCCAAAACTAGAAGCCACTCACTTGGAAAAGGCCAAGGAACTTTATACAAGAGTTCTGATTCA GCATTCTGCTAATCTTTATGCTGCCAACGGTGCTGGGGTAGCCTTAGCAGAAAAAGGCCATTTTGATGTTTCAAAGGATATCTTCACACAGGTTCAAGAA GCCGCAAGTGGCAGTGTTTTTGTCCAGATGCCGGATGTTTGGATAAACTTGGCACATGTTTATTTTGCCCAGGGGAGTTTTTCTTTGGCTGTGAAAATGT ATCAGAATTGCTTACGGAAGTTTTATCATAACACAGACTCACAAATACTTCTATATTTAGCTCGTACCCATTATGAAGCTGAACAGTGGCAAGATTGTAT AAAAACTCTACTGAGAGCCATCCATTTGGCACCCTCAAATTATACGTTAAGGTTTGATGCAGGGGTTGCAATGCAAAAGTTTTCAGCATCAACACTCCAA AAGGCAAAGAGGACCGCAGATGAGGTGAGAACAACTGTTGCAGAGCTGCAAAATGCTGTTCGTATATTCAGTCAGTTGTCTGCTGCTTCCAACCTACATA TTCATGGATTTGATGAGAAGAAAATTGATACTCATGTTGGATATTGCAACCACTTACTTTCGGCTGCTAAAGTCCATCTTGAAGCAGCTGAGCATGAGGA GCAGCAAGTACGACATACACAAGAACTTGCTCGTCAGGTTGAACTGGCTGAGGCAAAACGGCGAAAGGCTGAAGAGGATTCAAAATTTCAGCTTGAAAGG AGAAAGCAAGAGGAAGAGTTAAGGCGAGTTCAACAACAGGAGGAGCATTTTAAGCGTGTCAGGGAGCAATGGAAGAGCAGTTCACACTCGAGACGGAGGG AAAGGTCGGATGATGAAGAAGGCGGAGCTAGTGAGAAGAGAAAAAGAAAAAGTGGAAAGAAGAGAAAGAAGGATAAGCACTCAAAATCGCACTATGACAC AGAAGAAACAGAAGGTTATATGGTGGATGAACAGGAAATCGCAGATGGAGATGCTGACTTATACGACAGAGAACCCCAAATGAACAATGATGCTGAGGAA AATGCACAGGATCTTCTTGCAGCGGCTGGACTTGAAGATTCTGATGCAGAAGATGAGATGGCTGCACCTTCCTCATCCATAGCACGGCGGAGGCAAGCAT TATCAGAATCTGATGATGATGAACCATTGATGAGACAATCAAGTCCTATAAGGGAAAATTCTACTGATATGCAACTGGAGAGTGATGGAGAAATAGGGGA TAGGGACAAGACAAATGGGGACAATGCTGGTGAAGAAGATTAGAAATGATATTCAATTTTCAACCCCACAAATTAGACATGTATATCAGTCATTTTTCCA GGGTGTCTATACTATTATTGTAATATTATGAGTTTTGATAATGTGTATACTTTGGAAAATTTTATTATGGTCCAAAAAAGGCCTCATTCATATTTCTTAT AGATATTGAATTTCATTATTTCAACAAATTAAATTGAAAGTTTTTGTAAGTAAATCAAAGCTACAAAATTTACAAAAAGTTGTTGGTCCATTGGCTGAGG TTAGATTCCTAGGAGCAACTTTTGTTGAGGGACATGCATTATGAAAAGGAATTAATTCTTTATGTATAGAG
• Tissue: pods
• Gene name: LI_gene_151884;
• Additional information: details;

Expression of Ll_transcript_501142

FPKM

• PAB: 2.5
• PNAB: 15.8
• PS1: 18.2
• PS2: 13.6
• PS3: 17.6
• PW1: 12.5
• PW2: 11.9
• PW3: 10.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_501142

• Blastp: Protein CTR9 homolog from Arabidopsis with 73.31% of identity
• Blastx: Protein CTR9 homolog from Arabidopsis with 72.48% of identity
• Eggnog: repeat-containing protein(COG0457)
• Kegg: Link to kegg annotations (AT2G06210)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019415251.1)
• Pfam: Tetratricopeptide repeat (PF13432.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;