Ll_transcript_501149

• Id Trinity: TRINITY_DN47349_c3_g1_i3
• Name Transcript: Ll_transcript_501149
• Sequence: ATCTATACCCAACATGCACTAAGAACACTTCTAAGATGATTTTTTTTGTTGGATTTTGATTCTTCTATTCAAAAAATGATTGTTCCAATAAGCAGTATCG CAGTTCAAATAGCAAGAGCACGTTAATTTGAATCATTCATCACTCTCTTACAACATAAACAAAGCAATTAGGGTTTTCTCTTCTCATTCAATCAATGGCT TCAGTGTACATACCAGTTCAAAATTCCGAGGAAGAGGTTAGGGTTTCTCTCGATCAACTTCCAAGGGATGCTTCCGATATCCTCGACATTCTCAAAGCTG AACAAGCCCCTCTCGATCTCTGGCTCATCATCGCGAGAGAGTACTTCAAGCAGGGGAAAGTTGATCAATTTCGCCAGATCTTGGAGGAAGGGTCCAGCCC TGAAATTGATGAATATTATGCTGATGTTAGATATGAGAGGATTGCTATCTTAAATGCCCTTGGGGCATACTATAGCTATCTTGGAAAAATAGAGACGAAA CAAAGGGAAAAGGAGGAACATTTCATTTTGGCCACACAATATTACAATAAAGCATCACGAATCGACATGCATGAGCCTTCCACTTGGGTTGGTAAAGGTC AGCTTTTGTTGGCAAAGGGTGAAGTGGAACAGGCATCAGCTGCATTTAAGATCGTGTTAGATGGAGATCGTGATAATGTTCCTGCTCTTCTGGGCCAGGC ATGTGTTGAGTTCAACCGTGGACGATATTCTGATTCACTTGAGTTGTATAAGAGGGCATTGCAAGTCTATCCAGATTGCCCTGCACCTGTGAGACTTGGC ATAGGTCTATGTCGCTACAAATTAGGTCAATTTGAAAAGGCTCAGCAGGCATTTGAGCGTGTTTTGCAGCTCGATCCAGAAAATGTCGAGGCTCTTGTTG CACTTGCAATAATGGACTTACGGACTAATGGAGCTGCTGGAATTAGGACAGGAATGGTTAAAATGCAGAGGGCATTTGAGATATACCCATACTGTGCAAT GGCTCTGAATTATCTTGCAAATCACTTTTTCTTTACTGGTCAACATTTTTTAGTAGAGCAACTGACTGAAACTGCATTAGCGGTTACCAATCATGGTCCA ACAAAGTCTCATTCTTATTATAATTTAGCACGCTCTTACCACAGCAAGGTTGGAAGCAAAATCTCTCTCTCTCTCTTGCTTTTCTTGTTGACATTCTTTT GAAATTTGAATGGGTTTGTATGGTAGGTTGAACTGTTAGAAGTTGAAGGAGAGTGATTAGTTTGTTTGTGTTCAAAGATGGAGTGATGCTCTAGTTTGTC TGTGCATCTATAATTTTTTCTCATATCAGAATTGGTTTGTAGTTTGATACTTTGATTAGTCATTTGCTGGGAGACATACGTTCACAAGCCTGGTGTTTTA GTCTCATCCTAAAAATCGTAATATTGGTAAAAGGAATGGAAGAATAAATGGCATCGTTGGGCATCTTTTGCCTATGATCAAACCTAGAAAATTTTATTTT CAAATGTCTTACTTCATGAAGGATAAGTATAAGTAATGGCTGCTAAAGCAATCTCTTATTGCTTAATAGTTTGTATAACAAAATATGTATTAGCTTTTCT TACTTATCTGTCAATGTTTTTCTAATGACTTTCATAAAATCAGTCTCTTTGTATCTAGTGTGGTAGATATTTATCAATATCCTCCTTCCACATGTCATAT GAAAATTTATTAGACCATTGTAATATTGATACATTATGATAATCTGCATACACAATGGAATTTCTTTCTTTTTTATCTGTATTTCCAATGGAATTTGAAA TTGTACCCTCATATTTGTTTCAATTGATTAACGTTAATAAGTTGCTTTTAGCCCTTTGAGGTTCTAACAAATATTAAGAAACAATTACTTATTTTTTGCT TGTTTTCGACAATTCTCTTCCTGACCATTAATCTTTTAATGATGATTGTAAAATTTGATGTTCAAAGGTCAGTATTTTTTTTGGTAGTGTTACGTCTAAC TTCCAAGCTTTTATTGTTGTTGATGGCACTAATTTTTCTCTCTTGACCATAGGGGGACTATGACAAAGCTGGGGTGTTTTACATGGCATCTGTCAAGGAA GTCAACAAGCCCCATGAATTTGTGTTTCCGTATTATGGTTTGGGACAAGTGCAATTAAAGTTGGGAGATTTTAGAAGTGCACTCTCAAACTTTGAAAAGG TTTTGGAGCTGTACCCGGATAATTGTGAGACATTGAAAGCACTTGGGCACATTTATGTTCACCTTGGTCAGACTGACAAGGGCCAGGAATTTATTAGGAA AGCTACAAAAATTGATCCCCGTGATGCTCAGGCATTTCTTGAACTGGGAGAATTGTTAATCCTGTCTGACACAGGAGCTGCGCTAGATACATTCAAAACT GCTCGTACTCTTTTTAAGAAGGGAGGTCAAGCAGTACCAATTGAATTACTCAATAATATTGGTGTTCTTCAGTTTGAAAGGGGAGAGTTTGAGCTTGCTC AACAGACTTTTAAGGAGGCTCTGGGTGATGGGATATGGCTTTCTTTTACTAACAAGGAAAATAAGCCTTCTGTTGATGCTGCTACTTCTACTCTTCAATT CAAGGACATGCAGTTATTTCATGACCTTGAAAGGAATGGTCACCATGTGGAAGTACCTTGGGATAAAGTCACAGTACTCTTTAACCTGGCCAGATTACTT GAGCAATTAAATGAATCTGGAACTGCAAGCATTTTGTATCGCCTAATCTTGTTCAAGTACCCAGATTATGTTGATGCATATCTGAGGCTAGCTGCTATTG CAAAAGCTCGGAACAACATTCTCTTAAGCATTGAACTGGTTAATGATGCCCTGAAGGTAAATGACAAGTGTCCAAATGCACTATCTATGCTTGGGGAGTT GGAGTTAAAAAATGATGATTGGGTGAAGGCGAAAGAAACTCTCCGAGCAGCTAGTGATGCAACTGATGGGAAGGACTCATATGCAACTCTTTCTCTAGGA AACTGGAACTACTTTGCAGCAGTTCGCAATGAGAAGAGAAATCCAAAACTAGAAGCCACTCACTTGGAAAAGGCCAAGGAACTTTATACAAGAGTTCTGA TTCAGCATTCTGCTAATCTTTATGCTGCCAACGGTGCTGGGGTAGCCTTAGCAGAAAAAGGCCATTTTGATGTTTCAAAGGATATCTTCACACAGGTTCA AGAAGCCGCAAGTGGCAGTGTTTTTGTCCAGATGCCGGATGTTTGGATAAACTTGGCACATGTTTATTTTGCCCAGGGGAGTTTTTCTTTGGCTGTGAAA ATGTATCAGAATTGCTTACGGAAGTTTTATCATAACACAGACTCACAAATACTTCTATATTTAGCTCGTACCCATTATGAAGCTGAACAGTGGCAAGATT GTATAAAAACTCTACTGAGAGCCATCCATTTGGCACCCTCAAATTATACGTTAAGGTTTGATGCAGGGGTTGCAATGCAAAAGTTTTCAGCATCAACACT CCAAAAGGCAAAGAGGACCGCAGATGAGGTGAGAACAACTGTTGCAGAGCTGCAAAATGCTGTTCGTATATTCAGTCAGTTGTCTGCTGCTTCCAACCTA CATATTCATGGATTTGATGAGAAGAAAATTGATACTCATGTTGGATATTGCAACCACTTACTTTCGGCTGCTAAAGTCCATCTTGAAGCAGCTGAGCATG AGGAGCAGCAAGTACGACATACACAAGAACTTGCTCGTCAGGTTGAACTGGCTGAGGCAAAACGGCGAAAGGCTGAAGAGGATTCAAAATTTCAGCTTGA AAGGAGAAAGCAAGAGGAAGAGTTAAGGCGAGTTCAACAACAGGAGGAGCATTTTAAGCGTGTCAGGGAGCAATGGAAGAGCAGTTCACACTCGAGACGG AGGGAAAGGTCGGATGATGAAGAAGGCGGAGCTAGTGAGAAGAGAAAAAGAAAAAGTGGAAAGAAGAGAAAGAAGGATAAGCACTCAAAATCGCACTATG ACACAGAAGAAACAGAAGGTTATATGGTGGATGAACAGGAAATCGCAGATGGAGATGCTGACTTATACGACAGAGAACCCCAAATGAACAATGATGCTGA GGAAAATGCACAGGATCTTCTTGCAGCGGCTGGACTTGAAGATTCTGATGCAGAAGATGAGATGGCTGCACCTTCCTCATCCATAGCACGGCGGAGGCAA GCATTATCAGAATCTGATGATGATGAACCATTGATGAGACAATCAAGTCCTATAAGGGAAAATTCTACTGATATGCAACTGGAGAGTGATGGAGAAATAG GGGATAGGGACAAGACAAATGGGGACAATGCTGGTGAAGAAGATTAGAAATGATATTCAATTTTCAACCCCACAAATTAGACATGTATATCAGTCATTTT TCCAGGGTGTCTATACTATTATTGTAATATTATGAGTTTTGATAATGTGTATACTTTGGAAAATTTTATTATGGTCCAAAAAAGGCCTCATTCATATTTC TTATAGATATTGAATTTCATTATTTCAACAAATTAAATTGAAAGTTTTTGTAAGTAAATCAAAGCTACAAAATTTACAAAAAGTTGTTGGTCCATTGGCT GAGGTTAGATTCCTAGGAGCAACTTTTGTTGAGGGACATGCATTATGAAAAGGAATTAATTCTTTATGTATAGAG
• Tissue: pods
• Gene name: LI_gene_151884;
• Additional information: details;

Expression of Ll_transcript_501149

FPKM

• PAB: 0
• PNAB: 0.3
• PS1: 0.2
• PS2: 0.2
• PS3: 0.2
• PW1: 0.2
• PW2: 0.2
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_501149

• Blastp: Protein CTR9 homolog from Arabidopsis with 68.21% of identity
• Blastx: Protein CTR9 homolog from Arabidopsis with 66.67% of identity
• Eggnog: repeat-containing protein(COG0457)
• Kegg: Link to kegg annotations (AT2G06210)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019415251.1)
• Pfam: Tetratricopeptide repeat (PF07719.16)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;