| Id Trinity | TRINITY_DN47349_c3_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_501151 |
| Sequence | ATCTATACCCAACATGCACTAAGAACACTTCTAAGATGATTTTTTTTGTTGGATTTTGATTCTTCTATTCAAAAAATGATTGTTCCAATAAGCAGTATCG CAGTTCAAATAGCAAGAGCACGTTAATTTGAATCATTCATCACTCTCTTACAACATAAACAAAGCAATTAGGGTTTTCTCTTCTCATTCAATCAATGGCT TCAGTGTACATACCAGTTCAAAATTCCGAGGAAGAGGTTAGGGTTTCTCTCGATCAACTTCCAAGGGATGCTTCCGATATCCTCGACATTCTCAAAGCTG AACAAGCCCCTCTCGATCTCTGGCTCATCATCGCGAGAGAGTACTTCAAGCAGGGGAAAGTTGATCAATTTCGCCAGATCTTGGAGGAAGGGTCCAGCCC TGAAATTGATGAATATTATGCTGATGTTAGATATGAGAGGATTGCTATCTTAAATGCCCTTGGGGCATACTATAGCTATCTTGGAAAAATAGAGACGAAA CAAAGGGAAAAGGAGGAACATTTCATTTTGGCCACACAATATTACAATAAAGCATCACGAATCGACATGCATGAGCCTTCCACTTGGGTTGGTAAAGGTC AGCTTTTGTTGGCAAAGGGTGAAGTGGAACAGGCATCAGCTGCATTTAAGATCGTGTTAGATGGAGATCGTGATAATGTTCCTGCTCTTCTGGGCCAGGC ATGTGTTGAGTTCAACCGTGGACGATATTCTGATTCACTTGAGTTGTATAAGAGGGCATTGCAAGTCTATCCAGATTGCCCTGCACCTGTGAGACTTGGC ATAGGTCTATGTCGCTACAAATTAGGTCAATTTGAAAAGGCTCAGCAGGCATTTGAGCGTGTTTTGCAGCTCGATCCAGAAAATGTCGAGGCTCTTGTTG CACTTGCAATAATGGACTTACGGACTAATGGAGCTGCTGGAATTAGGACAGGAATGGTTAAAATGCAGAGGGCATTTGAGATATACCCATACTGTGCAAT GGCTCTGAATTATCTTGCAAATCACTTTTTCTTTACTGGTCAACATTTTTTAGTAGAGCAACTGACTGAAACTGCATTAGCGGTTACCAATCATGGTCCA ACAAAGTCTCATTCTTATTATAATTTAGCACGCTCTTACCACAGCAAGGTTGGAAGCAAAATCTCTCTCTCTCTCTTGCTTTTCTTGTTGACATTCTTTT GAAATTTGAATGGGTTTGTATGGTAGGTTGAACTGTTAGAAGTTGAAGGAGAGTGATTAGTTTGTTTGTGTTCAAAGATGGAGTGATGCTCTAGTTTGTC TGTGCATCTATAATTTTTTCTCATATCAGAATTGGTTTGTAGTTTGATACTTTGATTAGTCATTTGCTGGGAGACATACGTTCACAAGCCTGGTGTTTTA GTCTCATCCTAAAAATCGTAATATTGGTAAAAGGAATGGAAGAATAAATGGCATCGTTGGGCATCTTTTGCCTATGATCAAACCTAGAAAATTTTATTTT CAAATGTCTTACTTCATGAAGGATAAGTATAAGTAATGGCTGCTAAAGCAATCTCTTATTGCTTAATAGTTTGTATAACAAAATATGTATTAGCTTTTCT TACTTATCTGTCAATGTTTTTCTAATGACTTTCATAAAATCAGTCTCTTTGTATCTAGTGTGGTAGATATTTATCAATATCCTCCTTCCACATGTCATAT GAAAATTTATTAGACCATTGTAATATTGATACATTATGATAATCTGCATACACAATGGAATTTCTTTCTTTTTTATCTGTATTTCCAATGGAATTTGAAA TTGTACCCTCATATTTGTTTCAATTGATTAACGTTAATAAGTTGCTTTTAGCCCTTTGAGGTTCTAACAAATATTAAGAAACAATTACTTATTTTTTGCT TGTTTTCGACAATTCTCTTCCTGACCATTAATCTTTTAATGATGATTGTAAAATTTGATGTTCAAAGGTCAGTATTTTTTTTGGTAGTGTTACGTCTAAC TTCCAAGCTTTTATTGTTGTTGATGGCACTAATTTTTCTCTCTTGACCATAGGGGGACTATGACAAAGCTGGGGTGTTTTACATGGCATCTGTCAAGGAA GTCAACAAGCCCCATGAATTTGTGTTTCCGTATTATGGTTTGGGACAAGTGCAATTAAAGTTGGGAGATTTTAGAAGTGCACTCTCAAACTTTGAAAAGG TTTTGGAGCTGTACCCGGATAATTGTGAGACATTGAAAGCACTTGGGCACATTTATGTTCACCTTGGTCAGACTGACAAGGGCCAGGAATTTATTAGGAA AGCTACAAAAATTGATCCCCGTGATGCTCAGGCATTTCTTGAACTGGGAGAATTGTTAATCCTGTCTGACACAGGAGCTGCGCTAGATACATTCAAAACT GCTCGTACTCTTTTTAAGAAGGGAGGTCAAGCAGTACCAATTGAATTACTCAATAATATTGGTGTTCTTCAGTTTGAAAGGGGAGAGTTTGAGCTTGCTC AACAGACTTTTAAGGAGGCTCTGGGTGATGGGATATGGCTTTCTTTTACTAACAAGGAAAATAAGCCTTCTGTTGATGCTGCTACTTCTACTCTTCAATT CAAGGACATGCAGTTATTTCATGACCTTGAAAGGAATGGTCACCATGTGGAAGTACCTTGGGATAAAGTCACAGTACTCTTTAACCTGGCCAGATTACTT GAGCAATTAAATGAATCTGGAACTGCAAGCATTTTGTATCGCCTAATCTTGTTCAAGTACCCAGATTATGTTGATGCATATCTGAGGCTAGCTGCTATTG CAAAAGCTCGGAACAACATTCTCTTAAGCATTGAACTGGTTACTACTATCCTTATGACCTTTTTCTTTGTCTTCCTTATTAATTATATGACATTACTATT TAGATGCTTCTTTCTTTAGGTTAATGATGCCCTGAAGGTAAATGACAAGTGTCCAAATGCACTATCTATGCTTGGGGAGTTGGAGTTAAAAAATGATGAT TGGGTGAAGGCGAAAGAAACTCTCCGAGCAGCTAGTGATGCAACTGATGGGAAGGACTCATATGCAACTCTTTCTCTAGGAAACTGGAACTACTTTGCAG CAGTTCGCAATGAGAAGAGAAATCCAAAACTAGAAGCCACTCACTTGGAAAAGGCCAAGGAACTTTATACAAGAGTTCTGATTCAGCATTCTGCTAATCT TTATGCTGCCAACGGTGCTGGGGTAGCCTTAGCAGAAAAAGGCCATTTTGATGTTTCAAAGGATATCTTCACACAGGTTCAAGAAGCCGCAAGTGGCAGT GTTTTTGTCCAGATGCCGGATGTTTGGATAAACTTGGCACATGTTTATTTTGCCCAGGGGAGTTTTTCTTTGGCTGTGAAAATGTATCAGAATTGCTTAC GGAAGTTTTATCATAACACAGACTCACAAATACTTCTATATTTAGCTCGTACCCATTATGAAGCTGAACAGTGGCAAGATTGTATAAAAACTCTACTGAG AGCCATCCATTTGGCACCCTCAAATTATACGTTAAGGTTTGATGCAGGGGTTGCAATGCAAAAGTTTTCAGCATCAACACTCCAAAAGGCAAAGAGGACC GCAGATGAGGTGAGAACAACTGTTGCAGAGCTGCAAAATGCTGTTCGTATATTCAGTCAGTTGTCTGCTGCTTCCAACCTACATATTCATGGATTTGATG AGAAGAAAATTGATACTCATGTTGGATATTGCAACCACTTACTTTCGGCTGCTAAAGTCCATCTTGAAGCAGCTGAGCATGAGGAGCAGCAAGTACGACA TACACAAGAACTTGCTCGTCAGGTTGAACTGGCTGAGGCAAAACGGCGAAAGGCTGAAGAGGATTCAAAATTTCAGCTTGAAAGGAGAAAGCAAGAGGAA GAGTTAAGGCGAGTTCAACAACAGGAGGAGCATTTTAAGCGTGTCAGGGAGCAATGGAAGAGCAGTTCACACTCGAGACGGAGGGAAAGGTCGGATGATG AAGAAGGCGGAGCTAGTGAGAAGAGAAAAAGAAAAAGTGGAAAGAAGAGAAAGAAGGATAAGCACTCAAAATCGCACTATGACACAGAAGAAACAGAAGG TTATATGGTGGATGAACAGGAAATCGCAGATGGAGATGCTGACTTATACGACAGAGAACCCCAAATGAACAATGATGCTGAGGAAAATGCACAGGATCTT CTTGCAGCGGCTGGACTTGAAGATTCTGATGCAGAAGATGAGATGGCTGCACCTTCCTCATCCATAGCACGGCGGAGGCAAGCATTATCAGAATCTGATG ATGATGAACCATTGATGAGACAATCAAGTCCTATAAGGGAAAATTCTACTGATATGCAACTGGAGAGTGATGGAGAAATAGGGGATAGGGACAAGACAAA TGGGGACAATGCTGGTGAAGAAGATTAGAAATGATATTCAATTTTCAACCCCACAAATTAGACATGTATATCAGTCATTTTTCCAGGGTGTCTATACTAT TATTGTAATATTATGAGTTTTGATAATGTGTATACTTTGGAAAATTTTATTATGGTCCAAAAAAGGCCTCATTCATATTTCTTATAGATATTGAATTTCA TTATTTCAACAAATTAAATTGAAAGTTTTTGTAAGTAAATCAAAGCTACAAAATTTACAAAAAGTTGTTGGTCCATTGGCTGAGGTTAGATTCCTAGGAG CAACTTTTGTTGAGGGACATGCATTATGAAAAGGAATTAATTCTTTATGTATAGAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_151884; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_501151
| Blastp | Protein CTR9 homolog from Arabidopsis with 68.17% of identity |
|---|---|
| Blastx | Protein CTR9 homolog from Arabidopsis with 64.39% of identity |
| Eggnog | repeat-containing protein(COG0457) |
| Kegg | Link to kegg annotations (AT2G06210) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019415251.1) |
| Pfam | Tetratricopeptide repeat (PF13181.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |