Ll_transcript_501153

• Id Trinity: TRINITY_DN47349_c3_g1_i5
• Name Transcript: Ll_transcript_501153
• Sequence: ATCTATACCCAACATGCACTAAGAACACTTCTAAGATGATTTTTTTTGTTGGATTTTGATTCTTCTATTCAAAAAATGATTGTTCCAATAAGCAGTATCG CAGTTCAAATAGCAAGAGCACGTTAATTTGAATCATTCATCACTCTCTTACAACATAAACAAAGCAATTAGGGTTTTCTCTTCTCATTCAATCAATGGCT TCAGTGTACATACCAGTTCAAAATTCCGAGGAAGAGGTTAGGGTTTCTCTCGATCAACTTCCAAGGGATGCTTCCGATATCCTCGACATTCTCAAAGCTG AACAAGCCCCTCTCGATCTCTGGCTCATCATCGCGAGAGAGTACTTCAAGCAGGGGAAAGTTGATCAATTTCGCCAGATCTTGGAGGAAGGGTCCAGCCC TGAAATTGATGAATATTATGCTGATGTTAGATATGAGAGGATTGCTATCTTAAATGCCCTTGGGGCATACTATAGCTATCTTGGAAAAATAGAGACGAAA CAAAGGGAAAAGGAGGAACATTTCATTTTGGCCACACAATATTACAATAAAGCATCACGAATCGACATGCATGAGCCTTCCACTTGGGTTGGTAAAGGTC AGCTTTTGTTGGCAAAGGGTGAAGTGGAACAGGCATCAGCTGCATTTAAGATCGTGTTAGATGGAGATCGTGATAATGTTCCTGCTCTTCTGGGCCAGGC ATGTGTTGAGTTCAACCGTGGACGATATTCTGATTCACTTGAGTTGTATAAGAGGGCATTGCAAGTCTATCCAGATTGCCCTGCACCTGTGAGACTTGGC ATAGGTCTATGTCGCTACAAATTAGGTCAATTTGAAAAGGCTCAGCAGGCATTTGAGCGTGTTTTGCAGCTCGATCCAGAAAATGTCGAGGCTCTTGTTG CACTTGCAATAATGGACTTACGGACTAATGGAGCTGCTGGAATTAGGACAGGAATGGTTAAAATGCAGAGGGCATTTGAGATATACCCATACTGTGCAAT GGCTCTGAATTATCTTGCAAATCACTTTTTCTTTACTGGTCAACATTTTTTAGTAGAGCAACTGACTGAAACTGCATTAGCGGTTACCAATCATGGTCCA ACAAAGTCTCATTCTTATTATAATTTAGCACGCTCTTACCACAGCAAGGGGGACTATGACAAAGCTGGGGTGTTTTACATGGCATCTGTCAAGGAAGTCA ACAAGCCCCATGAATTTGTGTTTCCGTATTATGGTTTGGGACAAGTGCAATTAAAGTTGGGAGATTTTAGAAGTGCACTCTCAAACTTTGAAAAGGTTTT GGAGCTGTACCCGGATAATTGTGAGACATTGAAAGCACTTGGGCACATTTATGTTCACCTTGGTCAGACTGACAAGGGCCAGGAATTTATTAGGAAAGCT ACAAAAATTGATCCCCGTGATGCTCAGGCATTTCTTGAACTGGGAGAATTGTTAATCCTGTCTGACACAGGAGCTGCGCTAGATACATTCAAAACTGCTC GTACTCTTTTTAAGAAGGGAGGTCAAGCAGTACCAATTGAATTACTCAATAATATTGGTGTTCTTCAGTTTGAAAGGGGAGAGTTTGAGCTTGCTCAACA GACTTTTAAGGAGGCTCTGGGTGATGGGATATGGCTTTCTTTTACTAACAAGGAAAATAAGCCTTCTGTTGATGCTGCTACTTCTACTCTTCAATTCAAG GACATGCAGTTATTTCATGACCTTGAAAGGAATGGTCACCATGTGGAAGTACCTTGGGATAAAGTCACAGTACTCTTTAACCTGGCCAGATTACTTGAGC AATTAAATGAATCTGGAACTGCAAGCATTTTGTATCGCCTAATCTTGTTCAAGTACCCAGATTATGTTGATGCATATCTGAGGCTAGCTGCTATTGCAAA AGCTCGGAACAACATTCTCTTAAGCATTGAACTGGTTACTACTATCCTTATGACCTTTTTCTTTGTCTTCCTTATTAATTATATGACATTACTATTTAGA TGCTTCTTTCTTTAGGTTAATGATGCCCTGAAGGTAAATGACAAGTGTCCAAATGCACTATCTATGCTTGGGGAGTTGGAGTTAAAAAATGATGATTGGG TGAAGGCGAAAGAAACTCTCCGAGCAGCTAGTGATGCAACTGATGGGAAGGACTCATATGCAACTCTTTCTCTAGGAAACTGGAACTACTTTGCAGCAGT TCGCAATGAGAAGAGAAATCCAAAACTAGAAGCCACTCACTTGGAAAAGGCCAAGGAACTTTATACAAGAGTTCTGATTCAGCATTCTGCTAATCTTTAT GCTGCCAACGGTGCTGGGGTAGCCTTAGCAGAAAAAGGCCATTTTGATGTTTCAAAGGATATCTTCACACAGGTTCAAGAAGCCGCAAGTGGCAGTGTTT TTGTCCAGATGCCGGATGTTTGGATAAACTTGGCACATGTTTATTTTGCCCAGGGGAGTTTTTCTTTGGCTGTGAAAATGTATCAGAATTGCTTACGGAA GTTTTATCATAACACAGACTCACAAATACTTCTATATTTAGCTCGTACCCATTATGAAGCTGAACAGTGGCAAGATTGTATAAAAACTCTACTGAGAGCC ATCCATTTGGCACCCTCAAATTATACGTTAAGGTTTGATGCAGGGGTTGCAATGCAAAAGTTTTCAGCATCAACACTCCAAAAGGCAAAGAGGACCGCAG ATGAGGTGAGAACAACTGTTGCAGAGCTGCAAAATGCTGTTCGTATATTCAGTCAGTTGTCTGCTGCTTCCAACCTACATATTCATGGATTTGATGAGAA GAAAATTGATACTCATGTTGGATATTGCAACCACTTACTTTCGGCTGCTAAAGTCCATCTTGAAGCAGCTGAGCATGAGGAGCAGCAAGTACGACATACA CAAGAACTTGCTCGTCAGGTTGAACTGGCTGAGGCAAAACGGCGAAAGGCTGAAGAGGATTCAAAATTTCAGCTTGAAAGGAGAAAGCAAGAGGAAGAGT TAAGGCGAGTTCAACAACAGGAGGAGCATTTTAAGCGTGTCAGGGAGCAATGGAAGAGCAGTTCACACTCGAGACGGAGGGAAAGGTCGGATGATGAAGA AGGCGGAGCTAGTGAGAAGAGAAAAAGAAAAAGTGGAAAGAAGAGAAAGAAGGATAAGCACTCAAAATCGCACTATGACACAGAAGAAACAGAAGGTTAT ATGGTGGATGAACAGGAAATCGCAGATGGAGATGCTGACTTATACGACAGAGAACCCCAAATGAACAATGATGCTGAGGAAAATGCACAGGATCTTCTTG CAGCGGCTGGACTTGAAGATTCTGATGCAGAAGATGAGATGGCTGCACCTTCCTCATCCATAGCACGGCGGAGGCAAGCATTATCAGAATCTGATGATGA TGAACCATTGATGAGACAATCAAGTCCTATAAGGGAAAATTCTACTGATATGCAACTGGAGAGTGATGGAGAAATAGGGGATAGGGACAAGACAAATGGG GACAATGCTGGTGAAGAAGATTAGAAATGATATTCAATTTTCAACCCCACAAATTAGACATGTATATCAGTCATTTTTCCAGGGTGTCTATACTATTATT GTAATATTATGAGTTTTGATAATGTGTATACTTTGGAAAATTTTATTATGGTCCAAAAAAGGCCTCATTCATATTTCTTATAGATATTGAATTTCATTAT TTCAACAAATTAAATTGAAAGTTTTTGTAAGTAAATCAAAGCTACAAAATTTACAAAAAGTTGTTGGTCCATTGGCTGAGGTTAGATTCCTAGGAGCAAC TTTTGTTGAGGGACATGCATTATGAAAAGGAATTAATTCTTTATGTATAGAG
• Tissue: pods
• Gene name: LI_gene_151884;
• Additional information: details;

Expression of Ll_transcript_501153

FPKM

• PAB: 0.3
• PNAB: 1.4
• PS1: 0.7
• PS2: 0.5
• PS3: 0.5
• PW1: 1.1
• PW2: 0.6
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_501153

• Blastp: Protein CTR9 homolog from Arabidopsis with 68.17% of identity
• Blastx: Protein CTR9 homolog from Arabidopsis with 70.72% of identity
• Eggnog: repeat-containing protein(COG0457)
• Kegg: Link to kegg annotations (AT2G06210)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019415251.1)
• Pfam: Tetratricopeptide repeat (PF13181.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;