Ll_transcript_501406

Id TrinityTRINITY_DN47352_c0_g1_i10
Name TranscriptLl_transcript_501406
SequenceATCGTCTACTATATATGACAGCGGCTAAAGTGGATTCTGAGATGTTATCGCGTGTTGTTCTTTTATTCTGATTTTGCGACGCTCTCTTCTCTTCTCTTCT TTCTGGAGACTAACTCTTCGGTTCGCTTCTTTTTCTTTTCTCCCTTCTCACTCTCTCTTTTCATTCTTCACTTCACATATTTCCTCTTTTCTGTTTTCTA TTCGCTCTTTTTTCTTTTTTCTTATGAATAGGGTTTTACTCATACTCTCTTCTTTTCGTTTAATCAATTTCGCAATTACTAACTAACACGTGAATCTTTG TTCATAGGTGAGAAAGTGCAAGCAATGGATGAGGTCAAGAAGCATAAATCTAGGAAAGACGGGGATTCTAAGCGGAGTCACCGTGATCCAGATCGTAATG CCGATAAGAGAGATTCCGAGACGCGGCGTCATGATAAAGACAAGAATAGTGATTCTGAAGATAGGCATGATAGAGATAGGGAGAAACGTAAGGATAAGGA AAGGACCCGAGTCAAGGATGTAGATAAAGAGCGAACTCGAGACAAGAAAGTCGAAAGAGATAGGGATGACAAGGAAAGGGAGAGGAGCGATAGGGTGAGA GAAAAAGATCGAGACAAGGTTAAGGAGAAGCGACGAGAGAAAGATAGGGAAAGGGAAAAGGAAAGGGAAAGGGAAAGGGAAAGGGAAAGGAGGGAGCGTG CGAGGGAGAAGGAAATAGAAAGAGAAAAGGGGAGGAGAGGACACGAGAGGGAGAAGCGTAGGAACGTTGATAGCAAAAACAGTGATGATGAATCGAGGGA GAGAGATAGGAAGCGGCATAGGAAAGATGATGATGATTACAAGGGGCGAGAGAGGGAAAGGATTGTCAGCAAGTCGAACAGGCAAACTGAGAATAGTGAA GCTAGCCCAAGGAAGAAGAGTAGTGAAGATGAGGACGGTACTAAAGATGATGAGAGTAAACCTACACGCGAAGAGGAGATGGAGATTGAACAAAGGAGAC TGGATGATGAAATGGAAAAGAGGCGGAGGAGAGTTCAAGAGTGGCAAGAGCTTAAGAGGAAGAGAGAAGAAACAGAAAGAGAAAAGCAAGGTGAAGCCAG TGCTGATGAACCTGAGTCCAGGAAGACTTGGACCCTTGAAGGGGAATCTGATGATGAAGAAGGACCGGCTGCTGGGAAACAGGACACAGCTATGGATGTA GATGAAGATGAAGATGAAAAACCTGCTGACAAGGAACCTATGGATTTGGTGGTAAGTCATGATAATGGAACAGTTGCGTCCGACTTACAGGATGGAAATA CTGGTGCTCCTGAAGATGAAGAGATCGATCCATTGGATGCTTTCATGAATTCTATGGTTCTTCCTGAAGTTGAAAAGCTGAACAATGCTGCAGCCTTGTC ACTTACTGATAAAGCTGCTGACTTGAAGCCCAAGGATAAGGAGGATGAGCAAAGTCGTGGTGGACAGGCAAGGAAAGGTTCAAATAAATCTATCGGGAGA ATAATTCCCGGTGAAGAGTTTGACTCAGATACTGCAGATCTTGAATTTGAGGGGGATCCATCCGATGAAGATGATGATGAGTTCATGAAAAGAGTGAAGA AAACAAAAGCTGAGAAGCTTTCTATAGTTGACCACTCGAAAATTGATTATATGCCATTCAAGAAAAACTTTTTTATTGAAGTGAAAGAGATATCGAAGAT GACTCTTGAAGAAGTTGCATTATATAGGAAGCAGTTGGAGTTGAAGATACATGGAAAGGATGTGCCGAAGCCTGTAAAATCATGGCACCAGACTGGACTT ACCAGCAAAATTTTGGACACAATAAAGAAGATGAACTACGAAAAGCCGATGTCTATTCAAGCTCAGGCGCTGCCAATAATCATGAGTGGTCGAGACTGCA TAGGCATTGCTAAAACTGGTTCTGGCAAAACACTTGCTTTTGTTCTGCCAATGTTGAGGCATATCAAGGATCAGCCACCAGTTGTTGCAGGAGATGGACC TATTGGGCTTATTATGGCCCCCACAAGAGAGCTTGTTCAACAGATTCACAGTGACATAAAGAAGTTTTCAAAGGTAATGGGTATCAGGTGTGTGCCTGTC TATGGAGGTTCTGGTGTTGCTCAACAAATTAGTGAGTTGAAACGTGGTGCTGAGATAGTGGTTTGCACTCCAGGTAGGATGATCGACATACTATGCACCA GTAGTGGAAAAATAACCAACCTGCGTCGAGTCACTTATCTGGTTATGGACGAGGCTGATCGAATGTTTGACATGGGATTTGAACCTCAAATCACACGTAT TGTTCAGAATATCCGGCCTGATCGTCAAACGGTTCTCTTCTCTGCTACTTTCCCCCGTCAGGTCGAAATTCTGGCTCGTAAAGTTTTGAATAAACCTGTT GAAATACAAGTTGGTGGGAGGAGTGTTGTGAACAAAGACATAACACAGACTGTTGAGGTGAGGCCAGAAAATGAGAGGTTCTTTAGACTCTTAGAAATAT TGGGGGAATGGTGTGAGAAAGGAAAGATTTTGATATTTGTTCACTCACAAGAGAAATGTGATGTTTTGTTCAAGGATTTGCTCAGGCATGGTTATCCATG CCTTTCTCTTCATGGGGCCAAGGATCAGACAGACCGTGAATCCACAATTTCTGATTTTAAAAGCAATGTTTGCAATTTGTTGGTTGCAACAAGTATTGCT GCCAGGGGATTAGACGTCAAGGAGCTTGATTTGGTCATTAATTTTGATGTTCCAAACCACTATGAAGATTATGTACATCGTGTTGGGCGCACTGGCCGTG CTGGCCGAAAGGGTTGTGCCATTACATTTATTTCCGAGGAAGATGCAAGATATGCACCAGATCTGGCAAAAGCCTTGGAGCTATCTGAGCAGGTTGTTCC CAATGACCTGAAAGCTCTTGCTGATAGCTTTATGGCGAAAGTGAATCAAGGACTTGAGCAAGCCCATGGAACTGGTTATGGAGGCAGTGGATTTAAATTT AATGAAGAGGAAGATGAGGTGAGGAAGGCAGCAAAGAAAGCACAAGCCAAAGAATATGGGTTTGAAGAAGACAAGTCAGATTCTGAAGATGAAGATGACG GTATCAGGAAGGCAGGTGGTGACATCTCACAACATCCGGCTCTTGCTCAGATTCTTGCTGCCCAGAAAGTGAATTCTCCAGCAATGCCGAATCCCATCTC CGTTGGCCAGCCGATTTCAAATGGCGGGATACCTTCTTTGTCAGCTGTTCTTGGTCTCCAGACCGCAACAGTCTTGCCTGGGAATGATGTGGCAGCTCGA GCAGCATTAGCTGCTATAAACCTGCAGCACCACTTAGCAAAGATACAATCTGAAGCATTGCCAGAGCATTATGTGGCCGAGTTGGAGATAAATGATTTCC CCCAGAATGCTCGCTGGAAAGTGACGCACAAGGATACTTTAGGCCCAATTTCTGACTGGACTGGAGCTGCAATTACCACTAGGGGGCAGCATTTTCAACC TGGCAAGATCCCGGGACCTGGAGAACGCAAACTCTACTTGTTCATTGAGGGTTCCAGTGAGCAGTCTGTTAAGAGAGCTAAAGCAGAGTTGAAGCATGTT TTGGAAGACTTCACAAATTTGCAACTTCCTGGTGGAACTCAACCAGGGAAATACTCCGTCGTATGAAGGGTAAGATTCTGATTTAATTGAACATATTATT GCTTGTTTTATTGATAGTAGCTAATTATAAATTATAAAAGTATCATGTTACGTACTTATTCAGGGGATAGATGGCTGCCCAGCTTAGTAGTCAGTGTTTT TTGTTACCTTCTCTGTTCCTTATTGCCATTATTGGTACCTAGTGTGAATAAGACTTGGTTTGATGGATTTCCTTTAGGATCAGAACACTAATATAGGTAT TCTTTTCTGGGTTTGTGTTTGAAATGAACATGATTTGGTGTATAATCAGATCTTAGCTAGTGAACAAGTGATATTTGTTTAGTGATGCTTTTATTTTGTT ATTATGATCTAAAAATATTCTGCAACCTAAGAGTAAATCTACTTTTGGTTGTCAACCTGAAGGCAAAATGGGACTCTGTATAACACACTTGTTTCGCGCC TCAGTCTGGGAAAGGCTGCACTTATTGTCTGCCTTTATTACCCATTCATTGTAATACAGGTATGAGTATTATTGTGGAAAGTCTGGCCCATCTATTCTTG TGTGTCTGTGTTTACCTCTATAAAAGTACTACTCTTAATATCTCTCTGCATACTATAACAATAAATATTAAGATGTTTTTATTTTTACTAAATTTTAAAG GCACAAACATCCTTTTGATTGTTTTCTTTCTTGTTCAGCATTCATTATGGTGCAGGTGGGCCTTTTGAGCCTATGCTTGCCTGTTCAATATACAATTGGT AAGAGCGGACCACCTTTATTATGTCGGCAGGGGTTCAAATCCTGTCAGGGTCAGTTGTTGGATGGTTATCTGTAAGTACATCAATAAGTGCTCGTTGAAC CTCGAGACTTGCTGATCTTGAGCTGAGGCAGCTATCCCATGACCCGAAATTTTTTTGTTACTAAGAAAAATTGTTCTGTCCATTTTACTTGTTTTGTGGC TGTGAAAGGTGCTAATAATATTGCGGCTTTGTTTCATCTAGGTCCTGTTTGATTTTGCAGCAAAAATCTCAAAATCTTGATTGTGCCCTGTAATATCCCA TGTGCATGAGTTGAGTCTTGGCCTCCTAGAACCTATGAAACTATCATGTGTTTGTTCTTCTGATTGTTATACGTGTCACTTTCAGATTTTGGCTTGGAGT TCTTTCATGATCATATCACGAGGGGAAACAAGGCGTAATGGGATATCGCATTATTGCCATAGTATGGATTTCAGAACGTGTACCAAAAACAATGCCCATG GCTCTTATACTTATCCTATCTAGAAAGAACTCTCAAATTCTGCATTTGTATTGCAATTCATAGGAATGTTATAAAATATTATATGGTTTGCTTAAAGCAT TTCTTGGAATTGTGGATGGAAAATTTTTGGCGACATTTTTCAAACAACTCTTATATTACATTATCTTTTTATTTATCTCTCTTTAATTACCC BLAST
Tissuepods
Gene nameLI_gene_151908; 
Additional informationdetails; 

Expression of Ll_transcript_501406

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_501406
BlastpDEAD-box ATP-dependent RNA helicase 42 from Arabidopsis with 69.87% of identity
BlastxDEAD-box ATP-dependent RNA helicase 42 from Arabidopsis with 70.41% of identity
EggnogATP-dependent RNA helicase(ENOG410XSQV)
KeggLink to kegg annotations (AT1G20920)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019444598.1)
PfamDEAD/DEAH box helicase (PF00270.28)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;