Ll_transcript_501396

• Id Trinity: TRINITY_DN47352_c0_g1_i5
• Name Transcript: Ll_transcript_501396
• Sequence: ATCGTCTACTATATATGACAGCGGCTAAAGTGGATTCTGAGATGTTATCGCGTGTTGTTCTTTTATTCTGATTTTGCGACGCTCTCTTCTCTTCTCTTCT TTCTGGAGACTAACTCTTCGGTTCGCTTCTTTTTCTTTTCTCCCTTCTCACTCTCTCTTTTCATTCTTCACTTCACATATTTCCTCTTTTCTGTTTTCTA TTCGCTCTTTTTTCTTTTTTCTTATGAATAGGGTTTTACTCATACTCTCTTCTTTTCGTTTAATCAATTTCGCAATTACTAACTAACACGTGAATCTTTG TTCATAGGTGAGAAAGTGCAAGCAATGGATGAGGTCAAGAAGCATAAATCTAGGAAAGACGGGGATTCTAAGCGGAGTCACCGTGATCCAGATCGTAATG CCGATAAGAGAGATTCCGAGACGCGGCGTCATGATAAAGACAAGAATAGTGATTCTGAAGATAGGCATGATAGAGATAGGGAGAAACGTAAGGATAAGGA AAGGACCCGAGTCAAGGATGTAGATAAAGAGCGAACTCGAGACAAGAAAGTCGAAAGAGATAGGGATGACAAGGAAAGGGAGAGGAGCGATAGGGTGAGA GAAAAAGATCGAGACAAGGTTAAGGAGAAGCGACGAGAGAAAGATAGGGAAAGGGAAAAGGAAAGGGAAAGGGAAAGGGAAAGGGAAAGGAGGGAGCGTG CGAGGGAGAAGGAAATAGAAAGAGAAAAGGGGAGGAGAGGACACGAGAGGGAGAAGCGTAGGAACGTTGATAGCAAAAACAGTGATGATGAATCGAGGGA GAGAGATAGGAAGCGGCATAGGAAAGATGATGATGATTACAAGGGGCGAGAGAGGGAAAGGATTGTCAGCAAGTCGAACAGGCAAACTGAGAATAGTGAA GCTAGCCCAAGGAAGAAGAGTAGTGAAGATGAGGACGGTACTAAAGATGATGAGAGTAAACCTACACGCGAAGAGGAGATGGAGATTGAACAAAGGAGAC TGGATGATGAAATGGAAAAGAGGCGGAGGAGAGTTCAAGAGTGGCAAGAGCTTAAGAGGAAGAGAGAAGAAACAGAAAGAGAAAAGCAAGGTGAAGCCAG TGCTGATGAACCTGAGTCCAGGAAGACTTGGACCCTTGAAGGGGAATCTGATGATGAAGAAGGACCGGCTGCTGGGAAACAGGACACAGCTATGGATGTA GATGAAGATGAAGATGAAAAACCTGCTGACAAGGAACCTATGGATTTGGTGGTAAGTCATGATAATGGAACAGTTGCGTCCGACTTACAGGATGGAAATA CTGGTGCTCCTGAAGATGAAGAGATCGATCCATTGGATGCTTTCATGAATTCTATGGTTCTTCCTGAAGTTGAAAAGCTGAACAATGCTGCAGCCTTGTC ACTTACTGATAAAGCTGCTGACTTGAAGCCCAAGGATAAGGAGGATGAGCAAAGTCGTGGTGGACAGGCAAGGAAAGGTTCAAATAAATCTATCGGGAGA ATAATTCCCGGTGAAGAGTTTGACTCAGATACTGCAGATCTTGAATTTGAGGGGGATCCATCCGATGAAGATGATGATGAGTTCATGAAAAGAGTGAAGA AAACAAAAGCTGAGAAGCTTTCTATAGTTGACCACTCGAAAATTGATTATATGCCATTCAAGAAAAACTTTTTTATTGAAGTGAAAGAGATATCGAAGAT GACTCTTGAAGAAGTTGCATTATATAGGAAGCAGTTGGAGTTGAAGATACATGGAAAGGATGTGCCGAAGCCTGTAAAATCATGGCACCAGACTGGACTT ACCAGCAAAATTTTGGACACAATAAAGAAGATGAACTACGAAAAGCCGATGTCTATTCAAGCTCAGGCGCTGCCAATAATCATGAGTGGTCGAGACTGCA TAGGCATTGCTAAAACTGGTTCTGGCAAAACACTTGCTTTTGTTCTGCCAATGTTGAGGCATATCAAGGATCAGCCACCAGTTGTTGCAGGAGATGGACC TATTGGGCTTATTATGGCCCCCACAAGAGAGCTTGTTCAACAGATTCACAGTGACATAAAGAAGTTTTCAAAGGTAATGGGTATCAGGTGTGTGCCTGTC TATGGAGGTTCTGGTGTTGCTCAACAAATTAGTGAGTTGAAACGTGGTGCTGAGATAGTGGTTTGCACTCCAGGTAGGATGATCGACATACTATGCACCA GTAGTGGAAAAATAACCAACCTGCGTCGAGTCACTTATCTGGTTATGGACGAGGCTGATCGAATGTTTGACATGGGATTTGAACCTCAAATCACACGTAT TGTTCAGAATATCCGGCCTGATCGTCAAACGGTTCTCTTCTCTGCTACTTTCCCCCGTCAGGTCGAAATTCTGGCTCGTAAAGTTTTGAATAAACCTGTT GAAATACAAGTTGGTGGGAGGAGTGTTGTGAACAAAGACATAACACAGACTGTTGAGGTGAGGCCAGAAAATGAGAGGTTCTTTAGACTCTTAGAAATAT TGGGGGAATGGTGTGAGAAAGGAAAGATTTTGATATTTGTTCACTCACAAGAGAAATGTGATGTTTTGTTCAAGGATTTGCTCAGGCATGGTTATCCATG CCTTTCTCTTCATGGGGCCAAGGATCAGACAGACCGTGAATCCACAATTTCTGATTTTAAAAGCAATGTTTGCAATTTGTTGGTTGCAACAAGTATTGCT GCCAGGGGATTAGACGTCAAGGAGCTTGATTTGGTCATTAATTTTGATGTTCCAAACCACTATGAAGATTATGTACATCGTGTTGGGCGCACTGGCCGTG CTGGCCGAAAGGGTTGTGCCATTACATTTATTTCCGAGGAAGATGCAAGATATGCACCAGATCTGGCAAAAGCCTTGGAGCTATCTGAGCAGGTTGTTCC CAATGACCTGAAAGCTCTTGCTGATAGCTTTATGGCGAAAGTGAATCAAGGACTTGAGCAAGCCCATGGAACTGGTTATGGAGGCAGTGGATTTAAATTT AATGAAGAGGAAGATGAGGTGAGGAAGGCAGCAAAGAAAGCACAAGCCAAAGAATATGGGTTTGAAGAAGACAAGTCAGATTCTGAAGATGAAGATGACG GTATCAGGAAGGCAGGTGGTGACATCTCACAACATCCGGCTCTTGCTCAGATTCTTGCTGCCCAGAAAGTGAATTCTCCAGCAATGCCGAATCCCATCTC CGTTGGCCAGCCGATTTCAAATGGCGGGATACCTTCTTTGTCAGCTGTTCTTGGTCTCCAGACCGCAACAGTCTTGCCTGGGAATGATGTGGCAGCTCGA GCAGCATTAGCTGCTATAAACCTGCAGCACCACTTAGCAAAGATACAATCTGAAGCATTGCCAGAGCATTATGTGGCCGAGTTGGAGATAAATGATTTCC CCCAGAATGCTCGCTGGAAAGTGACGCACAAGGATACTTTAGGCCCAATTTCTGACTGGACTGGAGCTGCAATTACCACTAGGGGGCAGCATTTTCAACC TGGCAAGATCCCGGGACCTGGAGAACGCAAACTCTACTTGTTCATTGAGGGTTCCAGTGAGCAGTCTGTTAAGAGAGCTAAAGCAGAGTTGAAGCATGTT TTGGAAGACTTCACAAATTTGCAACTTCCTGGTGGAACTCAACCAGGGAAATACTCCGTCGTATGAAGGGCAAAATGGGACTCTGTATAACACACTTGTT TCGCGCCTCAGTCTGGGAAAGGCTGCACTTATTGTCTGCCTTTATTACCCATTCATTGTAATACAGGTATGAGTATTATTGTGGAAAGTCTGGCCCATCT ATTCTTGTGTGTCTGTGTTTACCTCTATAAAAGTACTACTCTTAATATCTCTCTGCATACTATAACAATAAATATTAAGATGTTTTTATTTTTACTAAAT TTTAAAGGCACAAACATCCTTTTGATTGTTTTCTTTCTTGTTCAGCATTCATTATGGTGCAGGTGGGCCTTTTGAGCCTATGCTTGCCTGTTCAATATAC AATTGGTAAGAGCGGACCACCTTTATTATGTCGGCAGGGGTTCAAATCCTGTCAGGGTCAGTTGTTGGATGGTTATCTGTAAGTACATCAATAAGTGCTC GTTGAACCTCGAGACTTGCTGATCTTGAGCTGAGGCAGCTATCCCATGACCCGAAATTTTTTTGTTACTAAGAAAAATTGTTCTGTCCATTTTACTTGTT TTGTGGCTGTGAAAGGTGCTAATAATATTGCGGCTTTGTTTCATCTAGGTCCTGTTTGATTTTGCAGCAAAAATCTCAAAATCTTGATTGTGCCCTGTAA TATCCCATGTGCATGAGTTGAGTCTTGGCCTCCTAGAACCTATGAAACTATCATGTGTTTGTTCTTCTGATTGTTATACGTGTCACTTTCAGATTTTGGC TTGGAGTTCTTTCATGATCATATCACGAGGGGAAACAAGGCGTAATGGGATATCGCATTATTGCCATAGTATGGATTTCAGAACGTGTACCAAAAACAAT GCCCATGGCTCTTATACTTATCCTATCTAGAAAGAACTCTCAAATTCTGCATTTGTATTGCAATTCATAGGAATGTTATAAAATATTATATGGTTTGCTT AAAGCATTTCTTGGAATTGTGGATGGAAAATTTTTGGCGACATTTTTCAAACAACTCTTATATTACATTATCTTTTTATTTATCTCTCTTTAATTACCC
• Tissue: pods
• Gene name: LI_gene_151908;
• Additional information: details;

Expression of Ll_transcript_501396

FPKM

• PAB: 0.2
• PNAB: 0.2
• PS1: 0.2
• PS2: 0
• PS3: 0
• PW1: 0
• PW2: 0.1
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_501396

• Blastp: DEAD-box ATP-dependent RNA helicase 42 from Arabidopsis with 69.87% of identity
• Blastx: DEAD-box ATP-dependent RNA helicase 42 from Arabidopsis with 70.41% of identity
• Eggnog: ATP-dependent RNA helicase(ENOG410XSQV)
• Kegg: Link to kegg annotations (AT1G20920)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019444598.1)
• Pfam: DEAD/DEAH box helicase (PF00270.28)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;