Ll_transcript_501593

• Id Trinity: TRINITY_DN47355_c2_g1_i8
• Name Transcript: Ll_transcript_501593
• Sequence: TCTGCTGTATGCGCATGCTAGGATTTGTTCCATTATCAGGAAATCTGGTAAAGACATAGAACAAGTAAAGAAAACTGGGAAAATAGTGTTGGATCATGAC GGTGAGCGTGCATTGGGGCTTCATTTGGTCCAATTTTCCGAGGTTGTGGAGCAGGCTTGCACTAATTTACTGCCCAGTACATTATGTGAATACCTCTATG ATTTGTCAGATATCTTCACCAAAAAGTTTTATTCAAATTGTCAGGTTATTGGGTCGCCTGAGGAAACTAGTAGGCTGTTGTTGTGTGAAGCAACTGCAAT TGTGATGAGAAAGTGCTTTTATCTCCTTGGAATTGAACCTGTTTACAAGATATAAAGGGTTCACATACATTTTTAACTTGTAACAAGAAAATTCATGTTA TGGATTCTACTCGAAACAAAAAAAACTGCAACTATACAGTGTCATTTTGCAATCTCAATCTTCAAAATAGTCTACAAATATGTTTGTTAGATGGCAGTTT TTAAGATACAACTACCAAGAAAGAACAGAAAATTGTGCTCATGTAGCATTTGCAATAACAAGCCATTTAGAAATCAGAGTTTAGATATTGCCATTTTCTA GTTTTTTATATTTACTTTTCTCCATTTTTCTTTCTACCAAACTCTATCAAAATTGTGATTATGCTTAGACAAGTATTGAGATGATATGATAATAAGTGAA ATATATATATATATATGTGTATGTATATACTATAGTAACATAAAGGAAAGCTAGCCCCTTTAGAATTATAAGGTAAAAAGAAAAACACGGTTCTTATTTT ATCCTCCATTGGATTGCACAAAACTCACATGAACATTTCCATGTTATGGAATATCTAGTGCTACCTTCCTTCAAATATTCTATCCAGCTCTGAAGCAAAC ATATAGGTGTTTGAAATCTGTCTTACACAGAGATTAATGGACAACTTTCTTTAAGTATTTAGGTTTCATGAATAACAAGTGCAACATATGGCATGTGCCT TTTTTCCCATTAGATCTGGCATGTGGCTTTATGTTGTGCCTGTGATCACATGTTCACATAAAAGTTCAATATAAACAACACAGTTCCAGGGCTTTAGCAT ATTAGTAACTATATATCTAAATTTGTCTGAACTTTAGCCTACCAGAGCCTATTTTTGCATACATTTGTTGCATACTGGAGTCAACATATAAAGCTAGCTA GACATTCCTTTTAGAGTAAATAAAATAAAAATAGTATTTATTGTATTCAAATTCAACTGCTAGACCATAGCATGGTGCCATCCAAGTCATGATCTAATGG CTTCTATGATCCTATTAAGAGTTGAATATATTGTTTGTTCAAACAATGGTGCATGCTAATCTGAGTTAGAATGTGGCTTATTTTCCCATGTGTTGTATCT GAAAATATATTGAAGATAGATATATGTTCAAACTCCATACACCCTTATGTACCAGTGAAATGCCACAAAAATTTCATATTGCAACAGTGCTATACATCAA ATAGTTGATAATTTGTGAAGATATAGAAAGTGATGGAACTTTTGCATTTTTTTATGCGGCTTATTTTATTGACAGTTATAGGGAGCCATGGCAAACTACT CCTAAAGAGATAGATGGTATAAGACCGCCAATTCTCCAGTCACAAACAAGACCCAGAGTTCTCCAAAATCAGGAATGTGATTCAACCCACCTCAGAAGCA CTTTGGGAGGTTCTAACTTGGAGTGCAAGATTAACCCAAGCTTGGAGTTCACATTAGGTAGACCAGATTGGAATGGCAAACAAAAATCCTAGTTTTGATT GGTTCCCTTATTGTCTTTTTTATTTTGCATTTTGTTTATAACTCATGGTGACATGTTTCCTGAAATGGAGAGGTGATGTTAGATATATGTATGAATTGGT TCCTAGAAGATGAAGAGAAAATCACTACATAACTTAACTTAGTTCTTTTTTGATGTATTTTAATGAGTTCATGAATAGTTTTGTTTATATTTTGTTTTTA TTTCAGCCTCTACATTACTGAGTTATGATGATTTTAGTCCGTGTTTTGTTTAATATTTAATCCATTTATTTTAGAGAGTTCATGAAAA
• Tissue: pods
• Gene name: LI_gene_151932;
• Additional information: details;

Expression of Ll_transcript_501593

FPKM

• PAB: 0.7
• PNAB: 6.4
• PS1: 7.2
• PS2: 5
• PS3: 5.9
• PW1: 4.6
• PW2: 4.5
• PW3: 2.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_501593

• Blastp: Arginine--tRNA ligase, chloroplastic/mitochondrial from Arabidopsis with 82.05% of identity
• Blastx: Arginine--tRNA ligase, chloroplastic/mitochondrial from Arabidopsis with 82.05% of identity
• Eggnog: arginyL-tRNA synthetase(COG0018)
• Kegg: Link to kegg annotations (AT4G26300)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019458197.1)
• Pfam: DALR anticodon binding domain (PF05746.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;