| Id Trinity | TRINITY_DN47356_c0_g1_i12 |
|---|---|
| Name Transcript | Ll_transcript_500974 |
| Sequence | TCTAGGTCCAAACTCCAAACTCGAAACTCAAAATCCACCGAAAACAAAGAGCGGGAGAAGAACAAAACTCTCAACTCTTTCACACTTTCATTTCACTCTT CACTTCACCTAATCTCACTTCCATTCCAAAACGACAATGTCCATCGGCGTTCGTCGCTTAACGGTTCTCGGCGAGTTCAAACCCTTTGGTCTCATCGCCG AAGCTCTCGACGGTAAAACCCTTGACTCTGTAACCGCCAACTACGATTACTTCCTTTTCGATCCACAAGCCGCTCGAGACCGAGTCGCCGAAGATGATTG CGATGAGGTTGCTTCTGCATTGAGCAACCGCGGTGATCATGAGTTATTCATCCGAGGGAATCGGATTATATGGTCGACTGGTGCAAGAGTCTTTAGGAGA TTTACCTTGAGTTCCTCTATTGTTAAGGTGTGCTGGTGTCGTTTGGGTCATTCAGCAGAAGCTCTTCTATGTATATTACAAACTGATTGTTTGACAATCT ATAATACCTCTGGGGAAGTAGTATCACTTCCACTTCATTCTGCAATCACATCAATATGGCCTCTTCCATTTGGTTTGTTACTCCAGCAGGAAGTGGAAGC AAATATATCATCACATGTTCCTTTTTCATCCACAAGCCCTTTGCTTAGTACACGCGATATGCTGCTTAGTGCCTCTCATCATATCCAAAAGGGAGAGGGA ACTTCGAAGTCCTCACATCTGATTCTGATGGATCCACTGGATGAGCAACAGCCAACTTTTATTGTAGAAAGAGGGAAGTTGAACATAATGAAGGAATATG ATGAAAAGACAATTTGGACAAGTGACCAGGTCCCGCTCATGGCATCCTATAATAAAGGAAAGATGCAGCACTCCCTGTGGGTTGTAGAAATCATCAATTC TAATATTGATGAGTCAACCACTGGTTTGTTAAATGTAGATCCTATGGGTGTATTGCCAAAACATTTGTCATTTCGTAGAATATGGCAGGGAAAAGGTTCT CAAGCAGCTGCTTATAAGGTCTTTATGGCCACAGATGATGATGCAGCTCCTGTTGTTTGCTTTATTCACCAAGAACAAAGAAAGTTGTTGTCTGTCAGGC TTCAGTGTGTTGAAATAAATAACGAGACTGTGTTTGACGTTAAGCCTGATATGAGCTGGACCATAGCTGCACTTGCAGCTTCACCTGTGACAGTAACTTG CCCTAGGGTCAAAGCTGGGCCACTTCCATATTCAGACATATTGGTTTTGGCTCCGGAAAATGTTCTGCTTCTCTATTCTGGGAAGCAATGCCTGTGTAGA TATGTACTACCTTCTTTCTTAAATAAAGATAAGCTTTTGCATGATTTGGAGTTTCCAGAAACATCTTCTCTTTCCAATGATTTAAAGATTACTGGGCTGG CTGATGCTGTTGATGGGCGTGTCAATGTGATAGTAAATTATAGGCAGGTGTTTAGATGTGCATTACAACAAAGTCCTTCATCATTATTAGCTAGTGATTG CAACACAGCACTTGCTGAGGGGCTTAATTCTAGTTCCTACAGACATTTTCTTGGTCTTCTCTGGAAAGATGGTGACCCTGCTCATTTGTCAGAGTCAGGG TCTAGTGTTGATTCAGAATGGGAGTCTTTTTGTGGTGTAATTATGCAAATCTGTAGAAAATCTAACATATCTCAAAAGCAGTCAGGTTCAGGGTCACACT CTGCTTGGGACTTCCTTCTCTCTAGTAAATTTCATGATAACTTCTGCAAAGTAAACTCCATGTTTGGAAGATCTTGTGCAGTATTACTTGATCAGCAGGA ATCAAATTTCCCTAGATCATCTGTTGTTGACAGACAAAGTTCTGAAAAGCCATTTCATACTGAACTTTTATTAGAATGTTTAGAATCTCTTCATGCACTT TACGAGAGCCTGAAACTGGATAATCTTCGCAAACGGGACTTAGAGCTTCTAGCAACGCTCTTATGCAATATTGCTCAATTTCTTGGTGAGGGCAACTACT TGGACCATTATATTCGTGATTTCCCTGGTCTCTATAAAAAGTTTCTGCTGCATGGAACTAGTTTTTCCCATAAAGTTTCTCCAAGTTTATTCAGATGGCT TGAGAACTGCTTACAACATGGATATGGTTATGCCAATATTAGTGACCTTCCACCTTTAGTCCGCAAAGATGGAAGTTCCGTGGTTAGCTTGGCCCGGAAA ATAGTTTCCTTTTATAGTATATTAACTGGTGCTAAATTGCTGGGAAAGAAGCTTTCTTCTGGGGTTTACTGTAACATTGCCATTGGATCACATTCCTTAA ATGAGGAACTTACTGTTTTAGCAATGGTTGGTGAAAGGTTCGGACTTCAACAGCTGGACTCACTGCCTTCTGGTGTTTCTCTTCCACTTCGTCATGCAGT AGATAAGTGTCGAGATTCTCCTCCCAATGACTGGCCAGCTGCTGCTTATATCCTTCTTGGTCGACAAGATTTAGCAATGTCAACTTTGGCACGGGAATGC AAGTATAGGGAAATTCAAACACCATCCAATGTGAATGTAATCTCTATGTCCACACCTTATATGCTAAATCTGCATCCTGTGACAATATCTTCTACTATCT CTGATGCAATTGGATTGGAAGGAACAAAGTTTGAAGATACAGATTCAGTTGATGGGTCTACGACTGATGGTATGGAGCATATTTTCAACTCTAGCACACA GTTGCGTTATGGTCGCGATCTGAGGTTGAATGAGGTTAGACGCCTTTTGTGCTCTTCCAGACCTGTGGCAATTCAAACATCTGTTAACCATAGTGCTTCT GATCAGGACCTCCAGCAGGCTCAATTGTGGCACCTTGCACAAAGGACCACTTCACTGCCTCTTGGACGTGGGGCATTTACTCTGGCAACTATATATACAC TCTTAACTGAGGCCTTTACAGTTCCGAAGCTTGTGTTAGCAGGTAGGTTGCCAGCCCAACAGAATGCAACTGTTAATCTTGACCCCAATATCAGAAACAT ACAAGAGCTCAAGTCTTGGCCTGAGTTTCATAATGCTGTTGCTGCTGGACTTAGATTAGCCTCTCTTCAGGGAAGAATGTCGAGAACATGGATAATTTAT AACAAACCTGAGGAGGCAAATTCTGTTCATGCTGGACTTCTCTTTGCTCTAGGATTGCATGGATATTTGCGTGTGCTAGTTATTACTGACATTTACCAGT ATTTAAATCAGGGGCATGAAACTACTACTGTAGGATTAATGCTTGGTCTGGCAGCTTCTTATAGAGGTACTATGCAACCAGCAATATCGAAGTGTCTTTA TATTCATATTCCCGGGCGGCATCCATCTTCCTTTCCAGAGATAGAAGTCCCAACCCTAGTACAGTCGGCAGCTTTAATGTCTGTGGGGATTCTATATGAA GGTTCAGCTCACCCACAAACAATGCATGTTTTATTGGGTGAAATTGGGCGCCGAAGTGGAGGTGATAATGTTCTTGAGCGGGAGGGTCATGCTGTATCTG CAGGATTTGCACTGGGTCTTGTTGCACTTGGACGAGGGGAAGATACACTTGGTTTTATTGAAACATTAGTGAATCGTCTGTTTCTCTACATCGGCGGAAA AGTTCACACTGAGAGATCTCATTTTTCGACAATCTCAATGGATGAAAATCGTGGTTCTGCACAGATGATGGATGGGACATCAGTTAATATTGATGTCACT GCACCTGGAGCTACCATTGCTCTTGCTTTGATGTTTTTGAAGACAGAATCTGAGGCTATTGTGTCAAGGCTCTCAATTCCAAATACATGTTTTGATCTGC AATATGTGAGGCCTGACTTCATAATGCTCCGTGTCATTGCTCGAAATTTAATAATGTGGAGCAGAGTTCATCCCTCGAAAGATTGGGTTTTTTCTCAAAT TCCTGAAGTTGTAAGATGTGGTGTAGAAGGCCTTGGAGTTGATGGCAATGACATTGATGATATGGATGCTGAGGCTTTTGTACAAGCTTATGTTAATATA GTAGCTGGAGCTTGTATATCTCTTGGGCTGGTATTTGCTGGCACAAGAAATGGAAATGCACAGGAGTTACTTTATGAATTTGCTGTATACTTTCTTAATG AGATCAAGCCTGTGTCCCCACCTAGTGGAAAGGTTTTTCCAAAGGGACTTTCTCGCTATGTTGATCGGCCCACATTGGAGACATGCCTTCATCTTATAGT TCTTTCTCTATCTGTGGTTATGGCTGGGTCTGGACATTTACAGACCTTACGATTGTTGAAATTCCTAAGGAGCAGAAATTGTGCAGATGGACAGTCTAGT TATGGCATTCAGATGGCTGTAAGCTTAGCTATTGGCTTCTTGTTTCTTGGTGGTGGAATGCGAACATTTTCCACCAACAACAGTTCCGTTGCTGCTTTGC TCATTACTCTATATCCACGCTTGCCTACTGGTCCAAATGATAACAGATGCCACCTTCAGGCATTTCGCCATTTATATGTCCTTGCAACAGAGGCGCGATG GATTCAGACGGTAGATGTCGACACAGGTCTGCCTGTTTATGCTCCTCTTGAAGTCACAGTCAGAGAAACTGAACATTATGCAGAATCTAGCTTTTGTGAG GTTACCCCTTGCCTTCTGCCAGAGCGAGCTATTGTAAGTCTAAATGGTCTATGAATGAAATCTTTGGAGTAGTTCATTTTGTCTTGCATACTTTATCGTT TTTGTCTCACAGTTTTCCCCCTTGAGTTAACTTCTATTTGATTGATTTTGGAATGAATCTTGTCATGAATCATCTCTCCCAAAAGCATAAGCTGTCAGGT ATAGCTTATGAATGGTTTTATAGCTAGCACACCCCTCACACGAGAAGCCCTTTGGGCTTGAACTGTGGAGAAACAAAATCCCACTCTACCATGTGCTGAT TTTAAACTTCTAATTCAGAAGAGTGGGTTGGCATGGATTGAATTCTTGACCACTCGGGTTTGGTCATCAAGGCTATATCATCTCATGAACCATCTTTCCT ACAAGCATAAACTGTTTGGTGGAGGTTCATAAATGATTTTATGGTACAAATATATTTGTTATTGTTGGATAGAGAAAAGTATTTGTAGATCTGATTTGTT TTACTTTGATGGTTACAGTTGAAAAGAATACGTGTTTGTGGGCCTCGCTACTGGCCTCAATTAATAGACTTTGCTCCTGAAGATAAACCATGGTGGAATT TTGAGGACAAGAAGAATCCATTTAATTCTGGTGTTCTTTATATCAAGAGAAAAGTTGGAGCTTGTTCATATGTTGATGATCCCATTGGTTGCCAGTCACT CCTGTCACGGGCTATGCACAAGGTGTTTGGCCTGACAAGTTCGGAAGCATCTGATACAACCACCAATATCCATAGTGGACCTGGTTCTGTTACAGTTGAT CAGTTGGTTGGTACCTTCTCATCTGATCCCAGTTTGATTGCTTTTGCACAACTTTGCTGTGACCCCTCCTGGCATAACAGGTAAGCCTGCATTTCTATAT TACTTTTCCATCCCTTGTCTTGGATCCATTTTGGTTGTTATATATTTGGTATTTCATCCTATTTCTTTAATTTATGAAAAGTTTCTTTAAAGTTTTTATT AGAATAGTGGCAAGGGTTTCATATACATATAGGACCCTCTAGCTGTGCCTAGAATTAAAAAATTTAAACACTAAACATAGACTAATTCTGACTGCTCATC CATGCTACAAAATTCTAGAAATTTTATAGTGTGTAGTATTGAGTTTTACTCTTACTGATCAGATCATGTAATCTTTAGTCGTGCCTTACTTTTTGAACAA TTATTACAGCATGTTGCATGCTGAAAGTATTCTCAAGGGCGAGGTCGCTTTTATCTATCTTCGCATCATAATTAACTACAGAGGATTGACAGATTTCTTT CGAGGGGCTTTGTTTTCTTTTCAGGCTTGCAAACCATTTATATTCTGTTATTCCCATATTTGTATTGAAGATCATAGATAATGAATCATAGATGTTACAA CTAAGGATGATGCGATATCTAAATAAACTAATGAAACTTGCTTGCAGATCTGATGTTGATTTCAAGGACTTCTGCTTGCAAGTATTATTTGAGTGTGTGA GCAAGGATAGACCAGCTCTTTTACAGGTCTATTTGTCATTATACACTACAGTTGAAGCAATGGTTAATCAAGTTGGTACTGGTGCCATTGTTTTTGGTGA CTCACTTTCTATATCGGGTTTTAAGGATCTTATGGTTAAGGCTTAAGGCACAGTTAAAGCTGGCTAGAGCGCCTAGCTATTGGGCATATTTTATCGTGGA GGGTTTTCTAGAAACAGACAAAGCATATTAGGGGTTTGAATGAGTCTAGTAAAGCTAAGCATTCGAAAAATGGTTGGGTTATGAGAAAAATAGGTGACTT AAGCAGTTAAGCTTGGCCCCTTGACTTAAATGAGCCAGATTTAAAGCTTGGGCTTGCTTTGATGTTACAAAGCTTGAGTTTGGTTCATTTAACATTACTA CAATGAATATGATAAAAAATGGTTCAAAGCCCCGGAAGTGTTATCCCCTTTGGGAAAAATTGTTTGCCTATAAATTTTTTTTTTTTTGCAGTTTATCGTA CTAATCTGCACTTGATCACTAAAAAAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_151943; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_500974
| Blastp | Anaphase-promoting complex subunit 1 from Arabidopsis with 60.96% of identity |
|---|---|
| Blastx | Anaphase-promoting complex subunit 1 from Arabidopsis with 60.83% of identity |
| Eggnog | Anaphase promoting complex subunit 1(ENOG410XQ83) |
| Kegg | Link to kegg annotations (AT5G05560) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019433711.1) |
| Pfam | Anaphase-promoting complex subunit 1 (PF12859.6) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |