| Id Trinity | TRINITY_DN47356_c0_g1_i17 |
|---|---|
| Name Transcript | Ll_transcript_500986 |
| Sequence | TATATGTCCATGTAGAAGAACTTATGGTCTTTGACCTTTTATACTTATGCTATACAGCTAAGAACTTATGCCTTGTGTGCAGAGTATTGATAGCTAAATG ATTTATTTGATTGTCTTTAGGTTATTCACTTACTATTTCTGCCATCCACTTTATGCATTTTTTTCTATAGGCTGTATCATATTCAGATTTTCTTTAGCAA TTAATTTTCCACTTTCAGTTTCTTAGATATATTTTACTGTGATTATATATGATCGTTATTGGCTTATTGCTTATAGGGACTTAGAGCTTCTAGCAACGCT CTTATGCAATATTGCTCAATTTCTTGGTGAGGGCAACTACTTGGACCATTATATTCGTGATTTCCCTGGTCTCTATAAAAAGTTTCTGCTGCATGGAACT AGTTTTTCCCATAAAGTTTCTCCAAGTTTATTCAGATGGCTTGAGAACTGCTTACAACATGGATATGGTTATGCCAATATTAGTGACCTTCCACCTTTAG TCCGCAAAGATGGAAGTTCCGTGGTTAGCTTGGCCCGGAAAATAGTTTCCTTTTATAGTATATTAACTGGTGCTAAATTGCTGGGAAAGAAGCTTTCTTC TGGGGTTTACTGTAACATTGCCATTGGATCACATTCCTTAAATGAGGAACTTACTGTTTTAGCAATGGTTGGTGAAAGGTTCGGACTTCAACAGCTGGAC TCACTGCCTTCTGGTGTTTCTCTTCCACTTCGTCATGCAGTAGATAAGTGTCGAGATTCTCCTCCCAATGACTGGCCAGCTGCTGCTTATATCCTTCTTG GTCGACAAGATTTAGCAATGTCAACTTTGGCACGGGAATGCAAGTATAGGGAAATTCAAACACCATCCAATGTGAATGTAATCTCTATGTCCACACCTTA TATGCTAAATCTGCATCCTGTGACAATATCTTCTACTATCTCTGATGCAATTGGATTGGAAGGAACAAAGTTTGAAGATACAGATTCAGTTGATGGGTCT ACGACTGATGGTATGGAGCATATTTTCAACTCTAGCACACAGTTGCGTTATGGTCGCGATCTGAGGTTGAATGAGGTTAGACGCCTTTTGTGCTCTTCCA GACCTGTGGCAATTCAAACATCTGTTAACCATAGTGCTTCTGATCAGGACCTCCAGCAGGCTCAATTGTGGCACCTTGCACAAAGGACCACTTCACTGCC TCTTGGACGTGGGGCATTTACTCTGGCAACTATATATACACTCTTAACTGAGGCCTTTACAGTTCCGAAGCTTGTGTTAGCAGGTAGGTTGCCAGCCCAA CAGAATGCAACTGTTAATCTTGACCCCAATATCAGAAACATACAAGAGCTCAAGTCTTGGCCTGAGTTTCATAATGCTGTTGCTGCTGGACTTAGATTAG CCTCTCTTCAGGGAAGAATGTCGAGAACATGGATAATTTATAACAAACCTGAGGAGGCAAATTCTGTTCATGCTGGACTTCTCTTTGCTCTAGGATTGCA TGGATATTTGCGTGTGCTAGTTATTACTGACATTTACCAGTATTTAAATCAGGGGCATGAAACTACTACTGTAGGATTAATGCTTGGTCTGGCAGCTTCT TATAGAGGTACTATGCAACCAGCAATATCGAAGTGTCTTTATATTCATATTCCCGGGCGGCATCCATCTTCCTTTCCAGAGATAGAAGTCCCAACCCTAG TACAGTCGGCAGCTTTAATGTCTGTGGGGATTCTATATGAAGGTTCAGCTCACCCACAAACAATGCATGTTTTATTGGGTGAAATTGGGCGCCGAAGTGG AGGTGATAATGTTCTTGAGCGGGAGGGTCATGCTGTATCTGCAGGATTTGCACTGGGTCTTGTTGCACTTGGACGAGGGGAAGATACACTTGGTTTTATT GAAACATTAGTGAATCGTCTGTTTCTCTACATCGGCGGAAAAGTTCACACTGAGAGATCTCATTTTTCGACAATCTCAATGGATGAAAATCGTGGTTCTG CACAGATGATGGATGGGACATCAGTTAATATTGATGTCACTGCACCTGGAGCTACCATTGCTCTTGCTTTGATGTTTTTGAAGACAGAATCTGAGGCTAT TGTGTCAAGGCTCTCAATTCCAAATACATGTTTTGATCTGCAATATGTGAGGCCTGACTTCATAATGCTCCGTGTCATTGCTCGAAATTTAATAATGTGG AGCAGAGTTCATCCCTCGAAAGATTGGGTTTTTTCTCAAATTCCTGAAGTTGTAAGATGTGGTGTAGAAGGCCTTGGAGTTGATGGCAATGACATTGATG ATATGGATGCTGAGGCTTTTGTACAAGCTTATGTTAATATAGTAGCTGGAGCTTGTATATCTCTTGGGCTGGTATTTGCTGGCACAAGAAATGGAAATGC ACAGGAGTTACTTTATGAATTTGCTGTATACTTTCTTAATGAGATCAAGCCTGTGTCCCCACCTAGTGGAAAGGTTTTTCCAAAGGGACTTTCTCGCTAT GTTGATCGGCCCACATTGGAGACATGCCTTCATCTTATAGTTCTTTCTCTATCTGTGGTTATGGCTGGGTCTGGACATTTACAGACCTTACGATTGTTGA AATTCCTAAGGAGCAGAAATTGTGCAGATGGACAGTCTAGTTATGGCATTCAGATGGCTGTAAGCTTAGCTATTGGCTTCTTGTTTCTTGGTGGTGGAAT GCGAACATTTTCCACCAACAACAGTTCCGTTGCTGCTTTGCTCATTACTCTATATCCACGCTTGCCTACTGGTCCAAATGATAACAGATGCCACCTTCAG GCATTTCGCCATTTATATGTCCTTGCAACAGAGGCGCGATGGATTCAGACGGTAGATGTCGACACAGGTCTGCCTGTTTATGCTCCTCTTGAAGTCACAG TCAGAGAAACTGAACATTATGCAGAATCTAGCTTTTGTGAGGTTACCCCTTGCCTTCTGCCAGAGCGAGCTATTGTAAGTCTAAATGGTCTATGAATGAA ATCTTTGGAGTAGTTCATTTTGTCTTGCATACTTTATCGTTTTTGTCTCACAGTTTTCCCCCTTGAGTTAACTTCTATTTGATTGATTTTGGAATGAATC TTGTCATGAATCATCTCTCCCAAAAGCATAAGCTGTCAGGTATAGCTTATGAATGGTTTTATAGCTAGCACACCCCTCACACGAGAAGCCCTTTGGGCTT GAACTGTGGAGAAACAAAATCCCACTCTACCATGTGCTGATTTTAAACTTCTAATTCAGAAGAGTGGGTTGGCATGGATTGAATTCTTGACCACTCGGGT TTGGTCATCAAGGCTATATCATCTCATGAACCATCTTTCCTACAAGCATAAACTGTTTGGTGGAGGTTCATAAATGATTTTATGGTACAAATATATTTGT TATTGTTGGATAGAGAAAAGTATTTGTAGATCTGATTTGTTTTACTTTGATGGTTACAGTTGAAAAGAATACGTGTTTGTGGGCCTCGCTACTGGCCTCA ATTAATAGACTTTGCTCCTGAAGATAAACCATGGTGGAATTTTGAGGACAAGAAGAATCCATTTAATTCTGGTGTTCTTTATATCAAGAGAAAAGTTGGA GCTTGTTCATATGTTGATGATCCCATTGGTTGCCAGTCACTCCTGTCACGGGCTATGCACAAGGT BLAST |
| Tissue | pods |
| Gene name | LI_gene_151943; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_500986
| Blastp | Anaphase-promoting complex subunit 1 from Arabidopsis with 68.35% of identity |
|---|---|
| Blastx | Anaphase-promoting complex subunit 1 from Arabidopsis with 67.15% of identity |
| Eggnog | Anaphase promoting complex subunit 1(ENOG410XQ83) |
| Kegg | Link to kegg annotations (AT5G05560) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019433711.1) |
| Pfam | Proteasome/cyclosome repeat (PF01851.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |