Ll_transcript_501527

• Id Trinity: TRINITY_DN47358_c7_g1_i4
• Name Transcript: Ll_transcript_501527
• Sequence: CAAAAAATAAGGAACACAATATGGCTTCAAGTACTAGTACCACTCCTAGCTACCCCATCAAAACCATTGTTGTTTTGGTACAAGAAAACCGTTCCTTTGA TCACATGTTGGGTTGGATGAAGTCCCTAAACCCAAATATCGAGGGGGTTACTGGTTCAGAGTCAAACCCGGTTTCCACGTCTGACCCTAACTCGGATAGG GTTCAGTTTGGTGACCGATCTGTTTATGTCGACCCGGACCCAGGCCACTCCATCCAAGATATCTACGAGCAAATTTTTGGGGAGCCGTGGAGCGAGGCTT CGGCGGCAAAAAAGTTGCCGCCGAAGATGGATGGTTTCGTCCAAAATGCTGCCAAGCAAGAGAAGGCGGGGGCGAAACCATCCACCCCCACAATGCCTGA GACGGTGATGAATGGGTTCAAACCGGAGTTAGTGCCGGTTTATAGAGAGTTGGTGAACGAGTTTGCCGTTTGTGATCATTGGTTCGCTTCGGTTCCGGCC TCGACTCAACCAAACCGGCTTTACGTGCACTCTGCCACGTCACATGGGTTGACTAGCAATGACACTAATCAACTTATTGGTGGGTTGCCACAAAAGACCA TATTTGATTCTTTAGATGAGAATGGATTCAACTTTGGGATCTATTATCAATATCCACCAGCAACTCTTTTCTACAGGAGTCTTAGGAAACTAAAATATGT AGACAAGTTTCATCCATTTGACATAACATTCAAGAAACATTGTGAAGAAGGGAAACTACCAAACTATGTAGTTGTTGAACAGAGATTTTGGGACATACCA GGTATACCTGGTAATGATGATCATCCATCCCATGATGTTGGAGAAGGACAAAAATTTGTAAAAGAAGTGTATGAAGCACTTAGATCAAGTCCACAATGGA ATGAAATATTGTTTATAATCATATATGATGAACATGGTGGGTTTTATGATCATGTTGCTACCCCTTTTGAAGGAGTTCCTAGTCCTGATGATATTGTAGG ACCAGACCCTTTCAAGTTTAAGTTTGAAAGACTTGGAGTAAGGGTTCCAGCTATCATTGTTTCTCCATGGATTCATCAAGGCACAGTGTTGCACAAACCT ACTGAACCATTTCCAACATCACAATATGAGCACTCATCTATACCAGCAACAGTGAAGAAGATATTCAATCTGCCTCAGTTTTTGACAAAAAGAGATGAAT GGGCTGGAACACTTGTCCCTCTTTTAACTAGAACCACTCCAAGGACTGATTGTCCAGTGAAATTGCCTGAGCCTATCAAACTAAGAGAGGTTGGTGCTCA AGAAGAGGCCAAGTTGACTGAATTTCAGGAAGAGTTGGTACAAATGGCTGCAACTCTAAATGGAGATCACAGAAAGAGTATATACCCCAACAAGTTAGTT GAGAACATGACTGTTCCAGAGGCAGTTAAGTATGTTGAAAATGCATTCAAAACATTCTTGGATGAGTGTGAAAAGGCAAAGCAAAGTGGAGTTGATGAAT CTGAAATTGTTGAGTGTGCTAAAGCAAGTGTTCCACCAGGTTCCAAAAATTTGTTTGACAAGGTGCTGTCTTGCATAATTTGTGATCGAAATTAACTTAC ACACGCTACCAAGGTTTTAAATTACGGTTGCGGCTATATTGTGTTTACTCATGAAGTCGCAATATAACTGTGAAGACTACCAAAACTGTAATATTATGAT CGCGATTGTGATTATAGATTGTATTTAGAATCATGCATGTTACTCATAGTTTCCATATGAAACACATTCTGCTATGTGTACAATTGGCTTTGGCATTGGA ACTATGTTGAATAAAAATGTCTATTTGTGTCTGAATCATCCTAAGAGTGAGTCATGTAAGGATTTGAACTATGTATTGCAACTTAATGATGAATTATTGC TGTTGTTAACAGAACACTTCTTTTTCATTAGGGATGTTTC
• Tissue: pods
• Gene name: LI_gene_151968;
• Additional information: details;

Expression of Ll_transcript_501527

FPKM

• PAB: 285.9
• PNAB: 2.8
• PS1: 4.2
• PS2: 7.9
• PS3: 12.6
• PW1: 4.2
• PW2: 2.4
• PW3: 1.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_501527

• Blastp: Non-specific phospholipase C3 from Arabidopsis with 62.28% of identity
• Blastx: Non-specific phospholipase C4 from Arabidopsis with 61.75% of identity
• Eggnog: phospholipase C(COG3511)
• Kegg: Link to kegg annotations (AT3G03520)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019449355.1)
• Pfam: Phosphoesterase family (PF04185.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;