Id Trinity | TRINITY_DN47359_c1_g1_i13 |
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Name Transcript | Ll_transcript_500627 |
Sequence | GTTGAATATTGATACTATAAGATAACAAGGATCAGTAACATCCCTATAGCCAGAAACAAACATAAAATCAAAAATGGAGATTGATCTAACTCCTCAACTA GCGAAGAAGGTGTACGAAGACAATGGTGGATCCTATTACTCTTGGTCCCCTTCTGATCTTCCCATGCTTCGTGAAGGAAACATCGCTGCAGCTAAACTCG CTCTTCAAAACAATGCTTTCGCTCTTCCTCGTTACTCTGATTCTTCTAAGGTTGCTTACGTTCTACAAGGAAATGGAGTTGCTGGAATAGTACTCCCTGA ATCGGAAGAGAAGGTTGTTTCAATCAAGACGGGTGATGCATTGGCAGTCCCCTTTGGTGTTGTAACCTGGTGGTATAACAAGGAAGATACTGAGTTGGTT GTTCTGTTCCTCGGGGACACTTCAAAAGCTCACAAGCCTGGTGAATTCACTGACTTTTTCCTGACTGGTTCCAATGGAATCTTCACCGGCTTTTCGACCG AGTTTGTCTCTAGAGCTTGGGATTTGGAAGAGAAAGATGCCAAGACCCTTGTTGGGAAACAATCAGGCAAAGGCATTGTGAAGCTGGAAGGGAATATCAG ACTACCTGAGCCTAAACCGGAGCACCGGAATGGCATGGCCTTGAACTGTTTAGAGGCTCCATTGGATGTTGACATTAAGGGTGGTGGAAGGGTTGTGGTG TTGAACACCAAGAATCTTCCATTGGTTGGTGAGGTTGGACTAGGAGCTGATCTTGTAAGACTGGATGGAAAAGCCATGTGTTCTCCAGGATTCTCTTGTG ACTCTGCTTTGCAGGTTACTTACATTGTCAGAGGGAGTGGCAGGGTTCAGGTTGTCGGTGTTGATGGCCGTAAGGTTTTGGAGACAACTGTCAAAGGTGG TAATTTGTTCATTGTGCCAAGGTTTTTTGTTGTCTCCAAGATTGCTGATCCTGATGGTTTGGAGTGGTTTTCCATCATCACCGGCACTCCCAATCCCATA TTTACACACTTGGCTGGAAGTTCATCTGTGTGGAAGGCACTATCACCTACTGTTCTGCAAGCTGCGTTCAATGTAGATTCAGAACTTGAGCAACTCTTCC GTTCAAAGAGGACTTCTGATGCTATTTTCTTCCCTCCACCAAACTAGATTCAATATACTAATATGACGTGCCAAAACTTCTATTGTGGAAATGTTCTAAG GAATTAGTGGAGTTACCATCTTAACTACTTTCCTTTTTAAATAAGGTATTTATATATCTTTTTTTTACATGTTCTTATGCTTATCTTTATTATTATATCC AAGCTAGATGCTTGGTTTATCTTTCATTTTTAACTAAGGAAGTTTAACTTCAATCCTTTTTTACCCGTTCTTATGTATGCTTATGCTTATGCTCATCTTA TTATGTTTAAGATAGATTCTTGGGTTATCAACATGCAACTCGAGAGTCATAAGTTGGTCTTATAGTGAAGATAATTTAATGATTATGGTACAAATTTACA TTCTAAAAAAGTGCCCATAAAACAAAAGCATGCAACCAATACCTTCCTAAACGACCTATAGCATCTTTTACTGTAGGCCCACCTTCAGTTTTTTCTCCCG AGTTTTCATAATTTTTATTTTCATTTAGAAATCAGTACAAATGGATCTAGTGCAATCTAAAAGTTGTCTCAAACTTATGAAGGATGCTTCAAGGGGACAA TCTTTGTGCTCCTAAGAACACTTCATATATTCAAGAGAGACCTTCATATTTTTATTTATTTTTTCTTTACTCTGATTGGCTTGGTACATAGTTAGGGACA TCCTTTGGGATAGCTGATTCCCATCCAACGTTTTTGGCCTAGAATTTTTTTTGTTGGTTCACTTCTTTGTGCTACTCATTGTATCATACTTTTTTGGTTG ATAAAAAAAATCCAACAGTTTCACTATTTGTATGACAAAATTGATTATCGATATTGTGTTTTTGTATTAACACTTTCACATTTATTGTTTTACCAAAGAA ATACTTATGTAATAGTTATTGAAGTAAAATTATCTACTGTACAAAACTTATGTTGTATACTTATGTATTCCACAATATCTTTAATTCATGCGAAATTACA AATTTGTATTTTAGGCATATGCTTATTTTCTAGTGTGATGATTTCACCTTAAAAATGTTAATAGGAGAACACATCTTTTATCTTAAAAAATATGTTACTT TATATACTCCTATAATTACTTAGAAAAACACACAATTATTAAACTATTGATTTAAATATATTCTTTTTGATCAAGATATAATATATAGATTTAGGTTTCT TACGTACAAGGAATGTACTTTAAGCTTTAAACCGCAGATATAATGAAAGGAACCGCAATTAATTCAAAACGCGTCTACTTTAACCAAACGTTTTCAAATA TTGAATTTGATTACCTAACCAAGTTTCATTAATTTGAAGTACGTACCATTTCATTAATGAGTATAAATATGGATCAGACGTGAGTGTAATTTCAGTGTTA GTAGTTTGCACATTAAATTTTTAATACAGTATATATTATTTTATCATTTTATGTTCATATATTAGCATGCAATTTTTATTATTTTGTATATACATGCATT TTCTGGTAAAGTATATACATATATTTTAAATACTTAAAAATAAAAAGGTACCTTATGATGTCCTATTTTGATATTAAAAAGAGTAAGATTGTCCATTATG TGATATCTCCACACACACATATATAATGATTTTAAGCAAGATTGTGGCTTACGTGTCCTCATTCTTGTAACACTTGGTGTCCCCAACCAATTAGAAAATC ACATTTAAATAAAAAGAAAAATTATAAATACAGAAATTCATATTTTCACATTATTTTATGATATTTGATAGGTTTGATACATGAGAACCTGATTTTTGTG GAATAGAGTATCCTTGTCCTATCTACCACACATTTCTTCTTTCTTAAATGTGCTTAAATATATAGGGTAAACAGTTACCTGTGAACTATTATGGCTTTTG ATGTAGTAGAATTTTACAACTTCTCTGCAATTGTAATTTCTTTATTATTACATCACAAAGTAGGTGCCTGTTATTGTATAGAAAAAGTGTAATATTTCTC CACCATTTGGAGAAAAATGATGTTGTAGGGGTCATGTGTGACCTTAGAAAAAAGGAACCTTTCCTTACAAACTAACAAACTACCCACATGTTGTACTGTA TCAAGTTGCATACCCCTCATTACATTTCCTACTCATGTTCACTTGATTAATACTCACTACATTTTTATGAAGTAGTACTTGTTCTTTGCATTTCAAATTC ATCAAATCCTCTCTTTGCCCTTGTTCTTCACTTCTTCCTATCTTCCCTAGCTTCTCTATCTCCAATGGAATCCCTTTATACACTTTATGTTGTTATAGTG TTGTACTTGTGTTACATGGTGTGGAAGTTGTTTGATCAGAGAAGGGACCAAGAGTGCTATATATTGGCCTACCAATGCTACAAGCCAAGTGATGATAGAA TGCTTGGAACAGATTGTTGTGGAAAGATCATGGAAAGGAACAAGAACTTGGGTCTTAATGAGTACAAGTTCCTCCTCAAAGCTGTTGTGAGTTCTGGAGT TGGTGAGAAAACTTATGCTCCAAGAAACATCATCCAAGGCCGCGAGGCGAATCCAACGTTGAATGATGGGATCATAGAGATGGAGGAGTTCTTCAATGAC AACATTGCAAAGCTCCTTGCAAAAACAGGCATTTCTCCTTCACAAATTGATGTACTTGTGGAGGAAAAGCAGTGATTGAGGGCATTGGAAAAAGCTTGGA TCTTTGTGACTATGATCTTGAGCCATCAAGGATGACACTACACCGTTTTGGTAA BLAST |
Tissue | pods |
Gene name | LI_gene_151974; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_500627
Blastp | Glutelin type-D 1 from Oryza sativa with 24.64% of identity |
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Blastx | 3-ketoacyl-CoA synthase 12 from Arabidopsis with 62.83% of identity |
Eggnog | seed storage protein(ENOG410YATH) |
Kegg | Link to kegg annotations (4328877) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019436234.1) |
Pfam | Cupin (PF00190.21) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |