Ll_transcript_500477

• Id Trinity: TRINITY_DN47360_c2_g1_i4
• Name Transcript: Ll_transcript_500477
• Sequence: CGAGTATTCAAAATTTCATATCAATCAACATTTATGCCAGTCAAATTGCATCGGCTCTGTCTAAAAAATAATAAGCACATGCCGTCCTTTCTCAAAGAAA CAACACATTAAAAAAAACATGTATATATGGTTATATTATATATGGTCAACTATATATGTCTTATCCGAACTTAAAAGATAAATTCAGATTATGTGATGAA GTTCACCATGGCCAATCTACCAGGGTTTACCTTCTTCCTTGTGTTCTTTCTAGCTCTTCTATTTCATACCCATGGAACCTATTCCAGTGATAGAAGCAGC AACCAAGTTGCCTTGTTTATTTTTGGCGATTCTTTCTTAGATGCTGGGAATAACAATTACATCAACACAACAACACTTGACCAAGCAAATTTCTGGCCTT ATGGCATAACCTATTTCAACTTCCCAACCGGAAGATTCTCTGATGGCCGTTTGGTATCAGATTTTATTGCCGAATATGCAAATCTGCCATTGATTCCACC ATTTATGGAACCTGGTAACATCCAATACAACAGTGGAGTGAATTTTGCGTCTGGAGGAGCAGGTGCTCTTGTTGAAACTTTTCAAGGCTCGGTAATATCC CTCGAAACACAAGCAATAAACTTCAACAAAGTTGTGACTCGATTGAGGGACAAGTTAGGCAGTTCTGAAGCTGAAAACTTGATATCAACGGCTGTGTACA TGTTTAGCATTGGAACTAACGATTACCTTAGCCCATTCTTGACTGCTTCTGATTTTCTTAACTTTCCCTCTCATTCAGAATATGTTGGCACGGTGATTGG TAATTTGAGTTCAATTATCCAGCGAATATATAACGGAGGAGCAAGAAAATTTGTGTTCATGAATGTGCCACCCTTGGGTAGTCTTCCAGGCACAAAAATA ATTCAATCAGAAAGAAATGATAGTTACTTACACGAACTTTCATCCCTTGCAACTCTACATAACAAAGCTCTATCCATGATTCTTTTACAATTGGAGAAAC AACTAAAGGATTTTAAATATTCTCTATATGATTTCAATGCTGATGTCACTCAAATGATGAACCAACCCTTAAAATATGGTTTGAAGGAAGGAAAATCAGC ATGCTGTGGATGGGGTGCATTTAGAGGAAAGTATAATTGTGGAGGGAAAAGAGGGGATAAGAGATTTGAGTTATGTGAGAAACCTAATGAATATTTGTAT TGGGATTCTTACCATCTTACAGAAAGTGCTTATAAGCAAATAGCTTTTAGGATGTGGAATTATAGAAGAAGCAACTCTCATACTCTAGGGCCTTACACTA TCAGAAATCTCTTCCAAGCATCATGATTGATTTGCTTTCTTATTTATTATCATCACTTTCTTACCCCAAAAATGTAAGAATAATTATGTATTTTCCAGAG ATAGGATTCATGCTTGCAAGCAAAAGTTTGTAATATGAAAATAGCATTTATCTTTGCAAGCAAAAACTACGGGATAGTCTCCTATTATAATCTATCATAT TAAAACAGCGTGATGAAGTAGCATTTATCTTTACTGTTAAGGAATTCTTGAAAACAAACATGACCTCCACTTTCATTAATGATTGCTCAACGTGCATGAA GTTAAATAGCGTGATGAAGTAGCAGAAGTTGAAACTTAAAGTCTGAGAT
• Tissue: pods
• Gene name: LI_gene_151985;
• Additional information: details;

Expression of Ll_transcript_500477

FPKM

• PAB: 54.2
• PNAB: 6.7
• PS1: 2.7
• PS2: 0.1
• PS3: 0.4
• PW1: 37.8
• PW2: 18
• PW3: 8.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_500477

• Blastp: GDSL esterase/lipase 5 from Arabidopsis with 54.76% of identity
• Blastx: GDSL esterase/lipase 5 from Arabidopsis with 57.18% of identity
• Eggnog: GDSL esterase lipase(COG3240)
• Kegg: Link to kegg annotations (AT1G53920)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019459089.1)
• Pfam: GDSL-like Lipase/Acylhydrolase (PF00657.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;