| Id Trinity | TRINITY_DN47361_c0_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_501780 |
| Sequence | CTTACAAACAATACCTTCCTGAAAAAGTGGTCACAGCATTATAGGTCTTATACTTTGCAACATGCTACTTTTCTTATCAATAGACTACCTAGCAAAATTC TTAAAAACAAATGTCCTTATGAACTATTGCATCAAACCACTCCTAATTTGGCTTATATTAGGGTCTTTGGATGTCAAGCATTTGCCACCACAAGTCCTTA TAACAGATCCAAACTAGAAGCAAGGTCTAGGAAATGTGTGTTTCTGGGATATAAGTTAGACACAAAAGGTTTTATTCTCCTAGACTTGAATAGCAAGCAA ATTTTTGTGTCAAGGAATGTTGCTTTTCATGAAAATATTTTTCCTTACATTGTGCACATTGATCCCCATGACTGAAACAACACCATCATCTACTAGTTAC AACACAAATGATCTGTCTTTCCTAGATATTGACCATCCTAATCTCAAAAACACAAACATAACAAGATCACCTCAAAATATTATCCAAACCTCACCCACAC ATAGTAGAATTTCTTCACCAATTGAACCTGACCAATACCAATCTACACCAGATCCTACCATTAGTCCAACAAGAAATGAACCTATCATTACACAATTGCC AATAAGCACCAGAAAATCAGATAGACCGAGACATCCTCCCACATATCTTACAGACTTTCACTACAACATTCTCACTTCATCTCCTCCATCATCAGAAAAA GGTCAAGGCTATGCAAACAGAATTAGAAGCACTAAAATTAAACAACACTTGGAGTTTGGTTGACTTGCTTAGTGGCAAAGTTCCCATTGGTTTCAAATGG GTTTATAGAATCAAATACAAGTCAGATGGCAGCATAGAGAGATACAAAGTCAGGCTTGTTGCAAAATGTTATAATCAAACTAAAGGGATTGATTTCTTTG ACATATTTGCACCTGTGATCAAGCTTACTACTGTAAGATTGTTATTGGCTATTGATGCATCTTAAAACTGGTTACTTCATCAACTTGATGTGAATAATGC ATTCTTGCATGGTGACTTGGATGAATATGTATATATGGAGGTTCCTGATGGTGTTGTCACTACAAAACCTAATAAGGTATGCGAATTGCATAAATCACTT TGGGCCTCAAGCAAGCAACTAGGCAGTGGTACACAAAGTTGTCTTCTTCTTTGATTTCCATTAGATACAAACAATCTACTCATGATCATTCTTTATTCAC CAAGAAGAACAACTCGAAATTCACTACTTTGCTTGTGTATGTTGATGATCTAATCCTAGGAGGCAATGATCCAACATAAATTTCTTTTGTTAAATATCAT CTTGATTCTGCATTCAAGATAAAAGATATAGGAGCATTGAGGTACTTTCTTGGATTTGAGGTTGCTAGATCTCATGCCAGAATCATTTTTTGCCAAAGGA AGTATGCCCTTGACATATTAGCAGACACTGGTTTCCTTGCCTCTAAACCAGTCTCAACACCCATGGTCAGAACCTCAAAAATTCACCAAGATTCTTCAAA TACATTTATTGATCAAGTCTCCTACACAAGACTAGTTGGTAGGTTGCTCTACTTGACAAACACTCGTCCATATTTGTCTTACTCTGTGCATCAATTGAGC CAGTTTCTAGCTAATCCTACAATCATGCATCATCAAGCTCTTACAAGAGTATTGAGGTACATAAAGGGTCCCCTGGTCAAGGGCTCTTCTACTCCTCCAA ATCTTCCCTTCAACTGAAAGCCTTTAGTGACTCTGATTGGGGCGCTTGCATTGACTCAAGGAAATCCATTTCTGGATATTATGTGTTCCTTGATCAATCC CTAATTTCATGGAGAACTAATAAACAAACCACTGTTGCTTGTTCTTCATCTGAGGCAGAGTACTAAGCATTAGCTGCAACTGCTTGTGAGCTTCAATGGA TCACTTATCTCTTGGCCAATTTCCACATTTCCTTCACTGTTCCTACTTGTTATATTGTGACAATGATTCTACAAGGCACATTGCTGCAAATTCAATGTTC CATGAGAGAACCAAACACGTTGATATTGATTGTCATGTTGTTAGGGAAAGATTGGAGGCCAAACTCTTCCATCTTCTACCCATTTCTTATGCTGAATAGT TGGCTGATATCCTCACAAAACCCTTGGATCCATCTCCTTTTCATTATCTTCTTGGCAAGATGGAAATAATTAACTTATACTCTCCAGCTTGAGGGGGGAT ATTGATGCATTCTAAGCTGCACACATTCTTCTTGTATCCAGCAACATATAGGAAAGGATTCACTAAGGGTTCACTCGTTACTTGCTTCCCAAGCAATTAC ACTCAAATGTATCTAGCTTGGTTCTAATTCTCTGATTTATGCTAGATGTATCTGCATATCTTTTAGGCTTGTCATTCATTAATGTATCTAGCCTAGTTTC ATTTCATTCAGTTTCTTGTTAATCAAGAAACTGATTCTGTTATGCTTTCCCGCCAATTCACTTGTATAAATAGGAAACTTGTAATTTGAATTCATTGAAT TGAAGTGAATAAAGAAAATGAGTTTCTCTCTCTGCCAATTGCTTTATGGTATCAGAGCTAGTCATTGATTACCAAAGCTGAGCAATACATCATTCCTCTT CCATTTTCTCTCAAATTCTTGTGCATTCTCTCCTTCAATTCTTCAGTGAACAGTTGCACTCTTCTGCAATTCAGCCAAGCTTTGAATCAGATCGAGAAAC CTCTTCATTTCTCAACAACAGTGATGCTCATAGTCCACTTTACTTGCATCCAGGTGAAAATCCAGGTGCAGTTCTTGTTACACCTCCTCTTGATGGTGTA AATTATCATGTTTGGAGTAGAGGTATGAAATGTGCTTTGCTTTCAACGAATAAGTATAAGTTTGTTGATGGATCTATCATTGTGCCTAATCAATGGATCC TGAGTTTCATATATGGGAACGATGTAACACTATGGTGGTTTCATGGATTACTCGTTGCATATCTCCAAACATAGCACAAAGTGTTGTGTACATAGAGAAT GAAGAAGAATTATGGCTGGATCTCAAGAGAGATTCTCTAAGGAAGACTATTTTAGAATGTCAGATGTTCTTCAAGAACTTCATTCTATTAAACAAGGTGA TAGGAGAATTTCTAATTACTTCACAGATTTGAAGATTCTATGGGAAGAACTAGAATCATTGAGAGTATTGCCTTCATGTGCATGCATTGTTAAATGTAAA TGTGAAATGATGAAAACTGTGAAGAAACAAAGAGATGTTGATTATGTTGTGTGTTTTCTAAAAGGATTAATTGATGAATTTAACACTACAAAGGCACAAA TCTTATTAATGGAGCCTTTGTCTCTAATAAACAAGACTTTTTCTCTGTTAGTTCAGCAGAAGAGGCAGCTAATTGGAATGAATCTTATTGCCCCAAAAAC AATGATTAATGTTGCTGAGAGATTCAATTTCAGATCAGGAAATGGAGGTGGATCTAGAAGAGGTTTTGTGAAAACCCGAGGAAGAAATAACAGCAGAGGT TATGGAAGAGGAATATCAACTAAGGTATGCACCTATTGTGGTAAAGAAAGGCACACAATTGAGACATGCTATCTCAAGCATGGCTTTCCACCACATTTCC AAAGTAGTAGAGGCAAACAAAGCACCGATGATGTAAATAGTGCTATCAAAATTGATTCAGAACGAAAGGAACAAATGGATTCATTGCCCCTTGGTAATCC AAAACTCTCACCTATCCTTAATTTTAGTGCTGAACAATATGATCAACTTACAGCCTTTCTTAAGAACTCAACCATGTCAAGCACACCTCATAATGTCAAT CAAATAAGTCTTGTTCCTGATAGTGAGTTACAACCCAAAGGTGAATGTTCAGGTAAGATAGAAAAATGGATCTTAGATTCTGGTGCTACAGACCATATAT GTCATAATTCTTTGTTGTTCATGTCTTATCATCTCATCAAACCTATTCATGTCAAATTGTCTGATGGAACCATCATACATACAAGCTATTCAGGAACTGT GAAGTTCTCTGACTCATTCATTCTATATGATGTATTGTTAATTCCAAGTTTTAAGTTCAATCTTATATCCATTAGCAAGTTAACCAAGTCTCTGAATTGT CAACTAACTTTTTATGATTCAAAATGTGTAATCCATGATATAATTACATTGAAGATGATTGGAATTGCTGAAGTGAGAAATGCTTTGTTTGTGATTAACA CCACTGTTTTTCAGTCCAAATCCAACCATGAAGGCCATAATGTGAACTCTGCTTTTCAAGCCAAAAACAATAAGCC BLAST |
| Tissue | pods |
| Gene name | LI_gene_151994; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_501780
| Blastp | - |
|---|---|
| Blastx | Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 50% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_014628734.1) |
| Pfam | - |
| Rfam | - |
| GO | - |