Ll_transcript_501840

• Id Trinity: TRINITY_DN47363_c0_g1_i16
• Name Transcript: Ll_transcript_501840
• Sequence: GTCAACAATAGACTTGGACAACAAATCACTAGCAACTTACTTGTACCGAAAGAAAACATTGCCTTTATCAGGACTTTATGTTCTTAAAAGAACAATATAA TAATGTTTTATGTAAAAAGAAAAGAAATAATTAAATTAAGAAGCGCATATACACGCAATCACCAACCACAATTGAAATAACTATTTGCTTTCGCTTCTTC TTCTTCATTCTCTTGTTCCCTTTCTCTGTTTTATTACAATCTCCTCTGTTCTTCTGGAAGCTTCTATCTTTTCCGTTCGTTTTTGTCAACCCTCTCTTCT CCTCCGATCGGTCCAGTTGACTTTTATGGCTACGATCGGACATAACAATCTCAATGCCAAATTGGTTCTCCTTGGGGATATGGGTGCTGGAAAATCCAGC CTCGTTTTGCGTTTTGTCAAGGGTCAATTCCTTGAATTCCAGGTTCTTTCACTCTCGAATCCTGTGATTACTTCTGTTTATTTCTCCTATTGTCAAATTC GTAATCCATAATTCTCCCCTAATATTCGGTGAATTACTTTGTTGCGTTTTCAATTGATGAAAATTTATATAGTTTTAAAATAAAGAAAATTGGAAGATGA GATAGGGAATAGTTGGTTTTAACTTTTTATACTTTGATGCTATTGAGCGAATCAAGCTATCTTGTTTCTAATAAATGCTTCTAAAACCTATGAATTTGAT TGTGAATATGGGATATTTTTAGTGAGACTAAATTGTTAACTTTAAAATGGGTAAATCCTTAAGTAATCTCAAGGGTTATTTATACTCTTAAAGGACTACA TTTGATTAAAATTTTCGCGACTTTGTTTGGGTCGATGTAAATTTAATCCAAGAGCATGCATGATTATGAAGTTCATGTGTCATGTTTTTAGTGGACTGAG CATACCACTCTGATATATTACATGAGAATTTTTTCCTTAAAATGAGGAGTTGCTTTTCTGATTTGCCAAACATTCATTGAGTTCTGGTTTTACACTAAAT GCTTTGTTGACCAAATACAATAAAAATGAATAACATGTGTAACAGTTCACCTTGTATCTTGGTCCCATGGAACAAGTTAGGCATCAGAGTGATTATCCTT AAAAGTATACTCCGGCAGGGAAAAAGAAGGCTGGGTCGGGTGGAAGATATATATAGAGAGAATTGCCTCTGTTTATGGTCCTCTGCAAGTAGATGTTTTT GTTCTCACAGGCTTTTATTTTATGCCAAAGCCATAAATAGAGATGTGGAGATTATGTTGCTGAATTTATTTGGTCTATTGTGGTGACAGGAATCGACAAT AGGGGCAGCATTCTTTTCACAGACATTGGCTGTAAATGATGCCACAGTGAAATTCGAGATTTGGGACACAGCTGGACAAGAAAGATACCATAGCTTGGCT CCCATGTACTACAGAGGCGCAGCTGCTGCTATCATTGTCTATGACATTACTAATTCGGATTCATTTACACGAGCTAAGAAGTGGGTCCAGGAACTTCAGA AGCAAGGGAACCCTAACATGGTTGTGGCTCTTGCTGGTAACAAAGCCGACCTGGAAGATAAGAGGAAAGTGACAGCTGAAGAAGCACGTGCATACGCTGA GGAAAATGGCCTGTTTTTCATGGAGACCTCTGCCAAAACTGCAGCCAATGTTAATGATGTATTTCATGAAATAGGTGAGGCCATTCCTTAATTGAATCAC ATTAGGTAATAGGTTAAGCAAATAAACTAAAATAGAATATCAGTCGTTGCATTCCAAGGAGGAGGACTGGGAGCCGAGGGAAACTCTTTTATAGGAAACA TCTGTCCCTGCTTTGCAAACCAAAATATTTCCATTATATTCACCACTGATTAAATAAACTGAAATTTTGCTAGACTCAAATGTGTTTGTTTTTCCTAATA TATATCTCTGCACACAAAGTTGATGAAGGTTATGAATGAATTTGGACATAAAACATTCATGAGTAAACGGCTCAGATATTAGCTGTTAAGGGTGCAACAT GTTGTAGTGAGTTCTTGTTGTAAACCTTTTCTTAGAAATACAGGGACATTTTTTTGTAGGTTTTACAATAGAATAAAGGACTGTCTAGTAAAAACAAGAT TAGAGTAATTTACTATTTTTATGGCTATAGTATCTTTCATGTGCTTCAGAATTGTTCCTTTTATGTACTTTGTATACATTGTCTGACTAACAATTGATTT TGTCTACAGCCAAGAGGTTACCAAGAGCTCAGCCAGCACAAAACCCGGCAGGGATGGTTCTTGTTGACAGACCGGCCGAAGGAGCCAGAGCTTCTGCATC ATGTTGCTCATAATTATCTATTCTGTATACCTATATCTCCCACCCTTAACTTATGCACCCTTTTCCTCTGTTTCCATGTACTGCACACTTTTGATATCCC TGTTATGTGGAGCTCCAACAAGTTCATGGGCTTCCTAGAATACTGATGCAAATTATAAAATAGAACTTGTGTTTGTAAAATATATATGTATCTCTCTTGG ATTTGGTTCATAGCACCATATAAACTACATCATATGATCAATAATCAATAATAACCACTCTTAATTTAAC
• Tissue: pods
• Gene name: LI_gene_152004;
• Additional information: -

Expression of Ll_transcript_501840

FPKM

• PAB: 26.6
• PNAB: 6.4
• PS1: 6.9
• PS2: 5
• PS3: 6.6
• PW1: 6.3
• PW2: 7.4
• PW3: 7.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_501840

• Blastp: -
• Blastx: Ras-related protein RHN1 from Nicotiana with 88.81% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_003553043.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;